Scomber japonicus (chub mackerel): 128367042
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Entry
128367042 CDS
T09718
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sjo04054
]
128367042
Pattern recognition receptors [BR:
sjo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128367042
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
PRY
SPRY
LRR_6
LRR_4
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
128367042
NCBI-ProteinID:
XP_053183811
LinkDB
All DBs
Position
10:complement(35862424..35935829)
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AA seq
958 aa
AA seq
DB search
MEKEQTDSEKKREDPPLTSDSRPPGDSQKPEQTQQTDSEKKREDPPLTSGPSGPPGACAA
KCRRKLKSNLEKKFQCVFEGIAKAGNPTLLNQIYTPLYITEGGTAEVNDEHEVRQIETAS
RKPDRPETTIRQEDFFKASPGRDEPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKANQDID
FTFPFTFRELNVVKEKKYSLVELVHHFFTETKEAGICRFEEFQVVFIFDGLDECRLPLDF
HNTEILTDVTESTSVDVLLTNLIRGKLLPSARLWITTRPAAANQIPPECVGMVTEVRGFT
DPQKEEYFRKRFKDEEQDSTIISHIKISRSLHIMCHIPVFCWITATVLEDVLKSRKRGEL
PKTLTEMYIHFLVLQCKLKKVKYDGGAETDPHWSSESRKMIESLGKLAFEQLQRGNLIFY
ESDLTECGLDIRAASVCSGVFTQIFKEERGLYQDKVFCFVHLSLQEFLAALHVHLTFIKS
GDNLLEEEQTTSRLSWSESAVDEALKSPNGHLDLFLRFLLGLSLQTNQTLLRGLLKQTGS
SSNTNQKTVEYIKKKLSENVSAERSINLFHCLNELNDRSLVEEIQQCLRSGSLSTDELSP
AQWSALVFILLSSEKDLDVFDLKKYSASEEALLRLLPVVKASNKALVADCNLSETSCAAL
SSVLSSQSSSLRDLDLSNNNLQDSGVKQLSAGLKSPHCGLETLSLSGCLITEGGCASLAS
ALSCNPSHLRELDLSYNHPGASGEKLLSAGLADPQWRLDTLRMDHGGPQRLKPGVRKYAC
ELELDPNTMNRNLKLSDNNRKVTCVMEDQSYPDHPDRFHSWSQLLCRNDLTGRCYWEVKW
RGRVSISVSYRRINRKGDSEDCRFGWNDQSWSLISSDGGYSVYHNKRETPISSSSSSSVS
NRVAVYVDCSAGTLSFYRVSSDTLIHLHTFNTTFTEPLCAGFGFYWHRSGSSVSLVPL
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagaacagacagactcagagaagaagagagaggatccccctctgacctctgac
tcaagacctccaggtgattcccaaaaacctgaacaaacccaacagacagactcagagaag
aagagagaggatcccccactgacctctggaccaagtggacctccaggagcttgtgctgca
aagtgtcgacgtaaactcaagtctaacctggagaagaagttccagtgtgtgtttgagggg
atcgctaaagcaggaaacccaacccttctgaatcagatctacacaccgctctacatcaca
gagggagggactgcagaggtcaatgatgaacatgaggtcagacagattgaaacagcatcc
aggaaaccagacagaccagaaacaacaatcagacaagaagacttctttaaagcctcacct
ggaagagatgaaccaatcagaacagtgatgacaaagggagtggctggcattgggaaaaca
gtcttaacacagaagttcactctggactgggctgaagacaaagccaaccaggacatagac
ttcacatttccattcactttcagagagctgaatgtggtgaaagagaaaaagtacagcttg
gtggaacttgttcatcacttctttactgaaaccaaagaagcaggaatctgcaggtttgaa
gagttccaggttgtgttcatctttgacggtctggatgagtgtcgacttcctctggacttc
cacaacactgagatcctgactgatgttacagagtccacctcagtggatgtgctgctgaca
aaccttatcagggggaaactgcttccctctgctcgcctctggataaccacacgacctgca
gcagccaatcagatccctcctgagtgtgtcggcatggtgacagaggtcagagggttcact
gacccacagaaggaggagtacttcaggaagagattcaaagatgaggagcaggacagcacc
atcatctcccacatcaagatatcacgaagcctccacatcatgtgccacatcccagtcttc
tgctggatcactgctacagttctggaggatgtgttgaaaagcagaaagagaggagagctg
cccaagaccctgactgagatgtacatccacttcctagtgcttcagtgcaaactgaagaag
gtcaagtatgacggaggagctgagacagatccacactggagttcagagagcaggaagatg
attgagtctctgggaaaactggcttttgagcagctgcagagaggcaacctgatcttctat
gaatcagacctgacagagtgtggcctcgatatcagagcagcctcagtgtgctcaggagtg
ttcacacagatctttaaagaggagagagggctgtaccaggacaaggtgttctgcttcgtc
catctgagccttcaggagtttctggctgctcttcatgtccatctgacattcatcaagtct
ggagacaatctgctggaagaagaacaaacaacatccaggttgtcctggtctgaaagtgct
gtggacgaggccttaaagagtccaaatggtcacctggacttgttcctccgcttcctcctg
ggtctttcactgcagaccaatcagactctcctacgaggtctgctgaaacagacaggaagt
agctcaaacaccaatcagaaaacagtggagtacatcaaaaagaagctcagtgagaatgtg
tctgcagagagaagcatcaatctgttccactgtctgaatgaattgaatgatcgttctcta
gtggaggagatccaacagtgcctgagatcaggaagtctctccacagatgaactgtctcct
gctcagtggtcagctctggtcttcatcttactgtcatcagaaaaagatctggatgtgttt
gacctgaagaaatactctgcttcagaggaggctcttctgaggctgctgccagtggtcaaa
gcctccaacaaagctctagtagcggactgtaacctctcagagacaagctgtgcagctctg
tcctcagttctcagctcccagtcctctagtctgagagatctggacctgagtaacaacaac
ctgcaggattcaggagtgaaacagctttctgctggactgaagagtccacactgtggactg
gaaactctcagtctgtcaggatgtctgatcacagagggaggctgtgcttctctggcctca
gctctgagctgcaacccctcccatctgagagagctggacctgagctacaatcatccagga
gcctcaggagagaagcttctgtctgctggactggcggatccacagtggagattggacact
ctcaggatggaccatggtggaccgcagagactgaaacctggtgtgaggaagtatgcctgt
gaactggaactggatccaaacacaatgaacagaaacctcaaactgtctgataacaacagg
aaggtgacatgtgtgatggaggatcagtcatatcctgatcatccagacagatttcactcc
tggtctcagctgctgtgtagaaatgatctgactggtcgctgttactgggaggtcaagtgg
agaggaagagtctctatatcagtgagttacagaagaatcaacaggaaaggagacagtgaa
gactgtaggtttggatggaatgatcagtcctggagtctgatctcctctgatggtggttac
tctgtctatcacaataagagagaaacacccatctcctcctcctcctcctcctctgtctct
aacagagtagcagtgtatgtggactgttctgctggcactctgtccttctacagagtctcc
tctgacacactgatccacctccacaccttcaacaccacattcactgaacctctgtgtgct
gggtttgggttctactggcacaggtctggttcctcagtgtctctggttcctctgtag
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