Scomber japonicus (chub mackerel): 128367105
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Entry
128367105 CDS
T09718
Name
(RefSeq) LOW QUALITY PROTEIN: matrilin-2-like
KO
K19467
matrilin
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
128367105
Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
128367105
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
FXa_inhibition
cEGF
VWA_2
EGF_CA
Matrilin_ccoil
hEGF
EGF_3
Sec23_trunk
Plasmod_Pvs28
EGF
Motif
Other DBs
NCBI-GeneID:
128367105
NCBI-ProteinID:
XP_053183884
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Position
10:22474754..22483904
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AA seq
798 aa
AA seq
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MRSLALGLFCLLCCNAVRLEKRRPRPLTAKGRNETTVQTKAVENPCKGIPLDFVFVIDSS
RSIRPNDYEKVKTFIINLLQFLEVSPDSTRVGLLQYGSVVQSEFSLNTFDTRTEVEQAVR
NMEHLATGTMTGLAIQYTMETAFSEAEGARPANLQIPRICMIVTDGRPQDTVEEIAAEAR
KAGIQIFAIGVGRVDMNTLKAIGSEPHSEHVHLVANFSQIESLISVFQSKLCGGSEMCDV
VDHQCQHICVSSPASFRCKCMEGFTLNPDGKTCKAEDICAEVDHGCEHICANLPDGYECR
CRPGYQLNINGKTCNKIDFCDLGNHGCEHDCVTIPGSYICRCKKGYVLNMDSKTCSKIDH
CADGTHGCEQEFMSTEDSCVCKCRTGYTLRPDGKTCKKVHYYALDTFGCKQEVINSDDXC
VFKCTKVCTLTSDXKTCKKIDHCADGTHGCEQEFMSTEDSCVCKCRTGYTLKPDGKTCKK
IDHCADGKHGCEQEFTSAEDSCVCKCRKGYTLRPDGKTCQSLDLCQTVDHGCEHQCVSTT
DSYICRCFEGFMLAEDGKSCKKSECGETVMDLVFVIDGSKSLGPANFELVKQFVNSIVDS
LDISRTGTHVGLLQYSTKVRTEFTLGQYTAAQDIKRAVARMQYMGRGSMTGSALRHMSEL
SFSAKEGARPNIPRVSIVFTDGRSQDDVSEWANRAKNSGVTIYALGVGKAIEPELREIAS
EPDEKHLYYAEDFEKMGEIAQKLKSRICRDKASDENMCQCENVIMFQTQVSQKLKNLLQN
IEALSKKMETLENQLVLK
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgaggtccctggccctcggcctcttctgcctgttgtgctgtaatgcagttcggctggag
aaaaggcgccccagacccctcacagccaaaggacgaaatgagactactgtccaaaccaaa
gcagtggagaacccttgcaaaggcatcccgctggattttgtctttgtaatcgacagttcc
cgaagcatccgccccaacgactacgagaaggtcaagacattcatcatcaacctgcttcag
tttcttgaggtcagccctgattccacacgtgtcggtctactccagtatggtagcgtggtc
cagagcgaattctctctcaacaccttcgacacaaggactgaggtggagcaggctgtgagg
aacatggagcacctcgccacaggaaccatgaccggtctagccattcagtacaccatggag
acggctttcagcgaggcagagggagcacgaccggcaaacctccagataccacggatatgt
atgattgtgactgatgggaggcctcaggatacagtggaggagattgcagctgaggcaagg
aaggccggcatccagatctttgctattggagtgggcagggtggatatgaacaccctgaag
gccatagggagtgagccacactctgagcatgtgcacctggtggcgaacttcagccagata
gagagcctcatctcggtgttccagtccaaactgtgcggaggttcagagatgtgtgatgtg
gtggaccatcaatgccagcatatctgtgtgagcagccctgcctctttcaggtgcaagtgc
atggaaggtttcaccctcaaccctgatggcaagacatgtaaagctgaggatatttgtgca
gaagtggatcatggctgtgaacacatctgtgccaacctgcctgatggttacgagtgccgc
tgtcgtccagggtatcaactcaacataaacgggaagacatgcaacaaaatagacttctgt
gacctggggaaccacggctgtgagcacgactgcgtcaccattccaggctcctacatctgc
agatgtaagaagggctacgtcctcaatatggacagcaagacctgcagcaagattgatcac
tgtgctgatggcacccacgggtgtgaacaggagttcatgagcacagaggactcctgtgtg
tgtaaatgcagaacaggctacacactcagacctgatgggaaaacatgcaagaaggttcac
tactatgcccttgatacctttggatgtaaacaggaggttataaactcagatgacnnttgc
gtgtttaaatgcacaaaagtctgcacactaacatctgatnngaaaacatgcaaaaagatt
gatcactgtgctgatggcacccacgggtgtgaacaggagtttatgagcacagaggactcc
tgtgtgtgtaaatgcagaacaggctacacactcaaacctgatgggaaaacatgcaagaag
atagaccattgtgctgacgggaaacacggctgtgagcaagagttcacgagcgcagaggat
tcatgtgtgtgtaaatgcagaaaaggctacaccctccgacctgatggcaaaacatgtcag
agtctggatctgtgccagacagtggaccacggttgtgaacaccagtgtgtcagcaccact
gactcctacatctgcagatgttttgaagggttcatgctggcggaggatggaaagagctgc
aaaaaatcggagtgcggtgagacagtcatggatctagtttttgtcattgatggctccaag
agtttgggccctgccaactttgagctagtcaagcagtttgtgaacagtattgtggactcg
ctggacatctccaggacaggcacacatgttggccttcttcaatactccaccaaggtccgc
acagagttcaccctgggccagtataccgcagcgcaggacatcaagcgagctgtggcgcgg
atgcagtacatggggagaggatccatgactggttcagccttacgccacatgtctgagctt
agcttttcagccaaagaaggtgccaggccgaacatcccacgtgttagcattgtcttcact
gatgggagatcacaggatgatgtttctgaatgggctaatagagctaaaaactctggagtc
accatttatgctttgggtgttggcaaagccattgaaccggagctgagagaaatagcatca
gagcctgatgagaagcacctttattacgctgaggattttgagaaaatgggagaaattgca
cagaaactcaaatccaggatatgtagagataaagcatctgatgaaaacatgtgccagtgt
gagaacgtgataatgtttcagacccaggtcagccagaaactgaagaacctgctacagaat
attgaagccttgtcaaagaagatggagacacttgagaatcaacttgtgctcaaatga
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