KEGG   Scomber japonicus (chub mackerel): 128367563
Entry
128367563         CDS       T09718                                 
Name
(RefSeq) tubulin alpha chain-like
  KO
K07374  tubulin alpha
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo04145  Phagosome
sjo04210  Apoptosis
sjo04530  Tight junction
sjo04540  Gap junction
sjo04814  Motor proteins
sjo05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    128367563
  09143 Cell growth and death
   04210 Apoptosis
    128367563
  09144 Cellular community - eukaryotes
   04530 Tight junction
    128367563
   04540 Gap junction
    128367563
  09142 Cell motility
   04814 Motor proteins
    128367563
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    128367563
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sjo03019]
    128367563
   03036 Chromosome and associated proteins [BR:sjo03036]
    128367563
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:sjo04812]
    128367563
   04147 Exosome [BR:sjo04147]
    128367563
Messenger RNA biogenesis [BR:sjo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     128367563
Chromosome and associated proteins [BR:sjo03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     128367563
Cytoskeleton proteins [BR:sjo04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    128367563
Exosome [BR:sjo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128367563
  Exosomal proteins of other body fluids (saliva and urine)
   128367563
  Exosomal proteins of colorectal cancer cells
   128367563
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 128367563
NCBI-ProteinID: XP_053184127
LinkDB
Position
11:complement(14690910..14697058)
AA seq 449 aa
MRECISVHVGQAGVQMGNTCWELYCLEHGIQPDGQMPSHKPIGGHDDSFTTFFSETGAGK
YVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIIDSVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDFGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGIDSFEEDEEGEEY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgtgaatgcatctctgtccatgtaggccaggctggtgttcagatggggaacacctgt
tgggagctctactgtctggagcacggtatccagccagatggccagatgcccagccacaag
cctataggaggccatgatgactctttcactaccttcttcagtgagactggggctgggaag
tatgtccccagagcaatctttgttgacctggaacccacggttattgatgaggtgcgcaca
ggaacataccgccagctcttccatcctgagcagctaatctcaggaaaggaggacgcagcc
aacaactatgcccgtggacactacactatcggcaaggagatcattgactctgtccttgat
aggatccgtaaactggctgatcaatgtactggtctccaaggcttcctggtcttccactcc
tttgggggaggcactggctctggttttacctctctgctaatggagagactctcagttgac
tttggcaaaaagtctaaacttgaatttgctatctacccagcccctcaggtctccacagct
gtagtggagccctacaactccatcctgaccactcacaccaccctggagcactctgactgt
gccttcatggtggacaatgaagccatctatgacatctgccgcaggaaccttgatattgaa
cgcccgtcctacaccaacttgaacaggctcatcagccagattgtgtcttcaatcacagct
tcacttcgctttgatggagccctgaatgttgacctgacagagttccagaccaacttggtg
ccctaccctcgtatccacttccctctggccacctatgcccctgtcatctctgctgagaaa
gcctaccatgagcaattgtctgttgcagagatcaccaatgcctgctttgagccagctaat
cagatggtgaagtgtgatcctcgtcatggcaaatacatggcctgctgtctgctgtatcgt
ggcgatgtagtgcccaaagatgtaaatgtggccattgctgccatcaagaccaaacgcacc
atccagtttgtggactggtgccccacaggcttcaaggtgggtatcaactaccagcctcca
acagtggttcctggaggagacctggccaaggttcagagggctgtgtgcatgctgagcaac
accacagccatcgctgaggcctgggctcgtcttgaccacaagtttgacctcatgtatgcc
aagagggcctttgtccactggtatgttggggagggaatggaggaaggggagttctcagag
gccagagaagacatggctgccctggagaaggattatgaagaggtggggattgactcattt
gaagaggatgaggaaggagaggaatattag

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