Scomber japonicus (chub mackerel): 128367573
Help
Entry
128367573 CDS
T09718
Symbol
usp9
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sjo01002
]
128367573 (usp9)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128367573 (usp9)
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128367573 (usp9)
Peptidases and inhibitors [BR:
sjo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128367573 (usp9)
Ubiquitin system [BR:
sjo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128367573 (usp9)
BRITE hierarchy
Motif
Pfam:
DUF3517
UCH
UCH_1
FAST_1
Vps23_core
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
128367573
NCBI-ProteinID:
XP_053184140
LinkDB
All DBs
Position
11:23591649..23631348
Genome browser
AA seq
2616 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQGQAPDAQSQPPLPQNQTSSPNSSNENSPVSPPDEQGQGDGPP
QLEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKCEACQR
FFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMAT
NPHCKFHIYNGTRPSETVPAGAQLADDELSARPPDPRSPKGWLVDLINKFGTLNGFQMLH
DRFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPIIEMVPQFLENLTDEELKKEA
KNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEV
NKVISSVSYYTHRHNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKILRF
VIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNA
SKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYS
CSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKMPINIQTNL
VGQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMETMRQFSKEEQAEFDPQTVRPG
SRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLM
GDEPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDD
LELIGLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKA
SYDTLCVLDGDKDSINCARQEAIRMVRVLTVLKEYINECDSDYHEERTILPMSRAFRGKH
ITLIVRFPNQGRQVDDLDIWSHTNDTIGSVRRGILNRIKANAAHTKIELFIGGEVVDPAD
DRKLIGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESC
LPGVIMSLHLRYISFLWQVADLGCNLNMPLLRDGARVLMKLMPPDNTTVENLRAVCLDHA
KLGENSLSPSLDSRFFGPSPSQVLYLIEVVYALLMPASATLGEDASDFQYNFLKSGGLPL
VLSMLTRNNFLPSADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPNAEGNIPVS
PINQATHDQALVLQSALQNIPNPASECMLRNVAIRLAQQISDENFFQASKYIPDICVIRA
VQKIVWASGCGTVQLVFSSNEEISKIYEKTNAAKEPDGEDEQVCCEALEVMTLCFALMPT
ALDTLSKEKAWQTFIIDLLLHCHSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVL
GSTAKERAKHAGDYFTLLRHLLHYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRTGETG
VEETILEGHLGVTKELLAFQTPEKKYYIGCEKGGANLIKELIDDFIFPASNVYLQYMKSG
EFPTEQAIPVCSTPASINAGFELLVALAVGCVRNLKQIVDTLTDMYYLGCETLTEWEYLP
PVGPRPNKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGTDVDDDMSGDEKQE
NESNVDPRDEVFSYHHQFDDKPSSKSEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGF
WKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGC
PHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIK
KLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPENQVI
QQNEPSEPTPPGSSKYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTE
CKMDDEEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDSLDKDSELVK
YITELTISSTKPHQVKMPGVIECSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSVYLNP
PPGQDHLLPEAEEIAMISAQLAARFLFSTGFHTKKVVRGPASDWYDALCILLRHSKNVRY
WFAHNVLFAYPNRFSEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSPTASPGPSTQG
CDNLSLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLNVPATFM
LVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVSTRMQSSINGNPPLPNPYGDTNLTA
PVMPVQQLVAEILFVRTSYVKKIIEDCSNSEETVKLLRFSCWENPQFSSTVLSELLWQVA
YSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQKRAYQ
CIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSPPV
QSNETSNGYFLERSHSARMTLAKACELCPEELKCTQGSPGKEPDEQEAPDDQDSSPPEDT
SLYPHSPGTTQFQQNNHPHGQPYTGPAAQHMNNPQRPGPASAPTPGPTQTQTQTQTPTPA
PGPTPGPGPRAQENWESTEEVAPAPTSTPAPAPPKE
NT seq
7851 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccacgcgtggctctccggtggggggcaatgacagtcagggccagggccag
gcacctgatgctcagagccaacccccactgccacagaaccagacatcatctccaaactca
tctaatgagaactctccagtgagcccaccagatgaacagggccagggggatgggccccct
cagctggaagaggaagagcccgctttcccccacactgacctagccaagctagatgacatg
atcaacaggcctcgttgggtcgttccagttttgccaaaaggagagttagaagtcctcttg
gaagctgctatagatctgagtaaaaaaggactggatgtgaagtgtgaggcatgtcagagg
tttttccgagatggtctgaccatctccttcacaaagatcctgacagacgaggcagtcagt
ggctggaagtttgagattcataggtgtatcatcaataacacgcatcggttggtggagctg
tgtgtggccaagctctctcaggactggttccccctactggagctgctggccatggccacc
aacccccactgcaagttccacatctacaatggcacacggccctctgagaccgtccccgct
ggagcacagctggctgacgatgagctctccgcccgaccaccagacccacgctcacctaag
ggctggctggtggacttaataaacaaatttggcacgttaaacgggtttcaaatgttgcac
gatcgcttcatgagtggccaagcactgaacgtccagatcatcgctgcacttatcaagcct
tttggccagtgttacgagttcctcacattgcacacggtaaagaagtacttccttccaatc
atcgaaatggttccccagtttctagagaatctcacagatgaggagcttaagaaagaggcc
aagaatgaagccaaaaacgacgcactgtccatgataatcaaatctctgaagaatctggct
tctcgtgtaccaggacaggaggagaccgtgaagaatttagagatttttaggttaaaaatg
attcttaggttattgcaaatttcttcttttaacggcaaaatgaatgcactaaatgaagtt
aacaaggtgatctccagtgtgtcctactacacacatcggcataaccctgaagaggaggaa
tggctgactgcagagcgcatggcggagtggatccagcagaaccacatcctgtccattgtc
ctgagggacagtttgcaccagccacagtacgtcgaaaaactggagaagatccttcgcttc
gtcatcaaagagaaagctcttacaatgcaggatctggacaacatctgggctgcacaggct
ggtaagcacgaggctattgtgaagaatgtccatgaccttctggccaaactggcgtgggat
ttctcacctgagcagcttgatcacctttttgactgtttcaaggcaagctggaccaatgcc
agcaagaagcagcgtgaaaaactgctggaacttatccggcgcctggctgaggatgataag
gatggggtgatggcccataaggtcctcaacttgctgtggaacctcgcacacagcgatgat
gtgcctgtagacatcatggaccaggctcttagtgctcacatcaaaatattggattacagt
tgctcacaggacagagacacacagaagatccagtggatagatcgcttcatagaggaacta
cgaaccaatgacaaatgggtgatccctgctctgaagcaaatcagagaaatctgtagcctc
tttggagaagctcctcaaaaccttagaaagaaaatgccaattaacatacaaacgaactta
gtgggtcaaacccagagaagtcctcatgtgttttaccgccacgacctgatcaaccagttg
caacataaccatgctctggtcaccctggtggctgagaacctctctgcctacatggagaca
atgaggcagttctccaaagaagaacaggctgagtttgaccctcagacggtcaggccagga
agccgctacagccatgtccaggaagtacaggaacgactcaacttcctgaggttcctccta
aaagatggccagctgtggctgtgcgcccctcaggccaagcagatctggaagtgtctggct
gagaatgcagtgtttctctgtgaccgcgaggcctgcttcaaatggtactccaaactgatg
ggtgatgagcctgacctggacccagacatcaacaaagacttctttgagaacaatgtcctg
cagttggacccatctctgctgacggagaatggcatgaagtgctttgagaggttcttcaag
gctgtcaactgcagggagggcaaattggtagcaaagcgcagagcctacatgatggatgac
ctggaactaataggcctggattacctctggagggtggtaattcaaggaagtgatgacatt
gccagtcgagccatagacctgctgaaagagatctacaccaatcttggaccaaaactgcaa
gtcaatcaggtggaaattcatgaagatttcatccagtcatgttttgaccgtctgaaggca
tcctatgataccctgtgcgtgttggatggagacaaagacagcatcaactgcgcccgtcag
gaggctatccgcatggtgcgagttctcactgtgctcaaggaatacatcaatgagtgtgac
agtgactaccatgaggagaggactatactgccgatgtcaagagctttccgggggaaacat
atcacattgatcgtacgtttccccaaccagggacgtcaggtggatgaccttgatatctgg
tcacacaccaatgacacaattggctcagttcggcgtggcatcctgaaccgaatcaaagcg
aacgctgcacataccaagatagagctctttataggtggggaggttgttgacccagctgac
gacaggaagctgattggacagctcaatctgaaggataaaacgctgatcacagccaaactg
acccaggtgagtgccaacatgccctcaagcccagacagctcctctgactcatccaccggc
tctcctggtaaccatggcaaccactacagcgatgggcctaaccctgaagtggagagctgt
cttcctggtgtgataatgtcgctgcatctgcgctacatctccttcctgtggcaggtggca
gacctgggctgcaatctcaacatgcccctgctcagagatggagcccgagttctcatgaaa
ctcatgcctccagataacactacagtggagaacctgcgagctgtgtgtctggatcatgcc
aagctcggtgagaacagcctcagtccttcgctggattcacgcttctttggcccctcgccc
tcacaagtgctctaccttattgaggttgtgtatgcattgctgatgccagccagtgccact
ctgggtgaggatgcaagcgacttccagtacaacttcctgaagagcggaggcctgcccttg
gtgttgagcatgctcactaggaacaacttcctgccatcagcagacatggagacacgtcgt
ggagcttacctcaacgcgctgaagattgccaaactcctccttactgctgtaggctttggg
catgttaaggctgtggctgaggcctgccagcccaacgctgagggaaatatacctgtttca
ccgattaatcaggccactcatgaccaggccctggtcctccagagtgccctgcaaaacatc
cccaaccctgcctcagaatgcatgctgcgcaacgtagccatccgcctggctcagcagatt
tctgatgagaatttcttccaggcatctaagtacatccctgacatttgtgtgatccgagcg
gtacagaaaatagtgtgggcttcaggctgtggcacagtgcagctcgtcttcagttctaat
gaagaaatcagcaaaatatatgaaaagacaaatgcagcaaaggagccagatggggaagat
gagcaggtgtgttgcgaggcccttgaagtgatgacattgtgcttcgccctcatgcccacg
gctctggacacacttagtaaagagaaggcttggcagaccttcatcatagacttgctgcta
cactgccacagcaaatctgtgcgtcagatggcccaggaacaatttttcctgatggcaacc
aggtgctgtatgggccatcgacccctcctcttctttatcaccctcctcttcaccgtgttg
gggagtacagccaaggagcgagccaaacacgctggggactatttcactttgctcagacat
cttctgcactatgcctacaacagcaacatcaacctgccaaacgctgaggtgctgctcaac
aacgagattgactggctgaaacggataagggatgaagtaaagaggacaggggagactggt
gtggaggagaccatcctggagggccatctcggggtcactaaggagcttctcgctttccag
acaccagagaagaagtattacattggctgtgagaagggaggagctaacctcattaaggag
ctgatcgacgacttcatcttcccagcatctaatgtttacctgcagtacatgaagagtggg
gagttccccacagagcaggccatcccagtgtgcagcacccctgcttccatcaacgctggc
tttgagctcctggtggctctggctgtcggctgcgtccgcaacctcaaacaaatagtcgac
actctaactgacatgtactacttaggttgtgaaacactgacagagtgggagtacttgcct
ccagtgggcccacggcccaacaaaggctttgtaggtctgaagaatgctggggccacctgt
tatatgaactcagtcattcagcagctgtacatgatccctccgatccgcaatggcatcctg
gccatcgagggcacaggcactgacgtggatgatgacatgtcaggggatgagaagcaggag
aatgagagtaacgtggatccgcgtgatgaggtgttcagctatcaccaccagtttgatgat
aagccctccagtaagtcagaggacaggaaagagtacaacattggggtactgcgtcaccta
caggtcatctttggccacctggctgcatccagactgcagtactatgtcccccggggattc
tggaaacagttcaggttatggggtgagccagtgaacttgagggagcaacatgatgctttg
gagtttttcaactctttggtggacagtctggatgaagctctgaaagccctgggccacccc
gccatgctcagcaaggtgctgggaggctcctttgctgaccagaagatctgtcagggatgc
ccccatagatatgaatgtgaggaatcgttcacaacgctcaatgtagacatcagaaaccac
cagaacctgttggactccatggagcaatatgttaaaggagatctgctggagggagccaac
gcctatcactgtgagaagtgtaataagaaggtggacacagtgaagcgcctgctgattaag
aagctaccgcctgtcctggccatccagctgaagcgctttgactacgactgggagagggag
tgtgccatcaagttcaatgactactttgaattccctagggagctggacatggagccgtac
acggtagcaggagtggccaagctagaaggggacgacgtcaacccggagaaccaggtgatt
caacagaacgagccctcggaacccacgcctccaggcagctccaagtaccgtctggtgggg
gtgctggtccactccggccaggccagcggcggacactactactcctacataatccaaagg
aacgggggcgatggcgagaaaaaccgctggtataagtttgatgatggcgacgtgactgag
tgcaagatggacgatgaggaggagatgaagaaccagtgcttcggtggggaatacatgggc
gaagtgttcgatcatatgatgaaacgcatgtcgtaccggaggcagaagcgctggtggaac
gcctacatcctgttctatgagcgtatggactcactagacaaggacagcgagcttgtcaaa
tacatcacggagttgaccatctcctccaccaagccgcatcaagtcaagatgcctggtgtc
atcgagtgcagcgtccgcaagcagaacgtccaattcatgcacaaccgaatgcaatacagc
ctggaatatttccagttcattaagaaacttctgacctgtaacagtgtctatttaaaccct
cctccaggacaagaccatcttctgccagaggcagaggagattgctatgataagtgctcag
ctggctgctaggttcctcttcagcacaggttttcacaccaagaaagtagtacggggtcct
gccagtgactggtatgacgccctctgcatcctgctgagacacagtaagaatgtacgctat
tggtttgcacacaacgttctgttcgcttatcctaaccggttctctgagtacctgcttgag
tgcccgagtgctgaggtgcggggcgcgtttgccaagctcatcgtcttcatcgctcacttc
tccctgcaagacggcccatgcccctcccctaccgcctcacccggaccctctactcagggc
tgtgataacctcagtctaagtgaccacctgttgagagctgtactcaacctgctcagaaga
gaggtttctgaacacggccgtcacctgcagcagtacttcaacctctttgtcatgtatgcc
aatctgggcctggcagaaaagactcagctgttgaagctgaatgtccctgccacattcatg
ttggtcgctctggatgagggtcccggccctcccataaagtaccagtacgctgagctggga
aagctctacactgtcgtctcccagctggtgcgctgctgtgacgtctccacacgcatgcag
tcctctatcaatggtaaccctcctctccctaacccctatggcgacaccaacctgacagct
ccagtgatgcctgtgcagcagctggtggcagagattctgtttgtgaggaccagctacgtg
aagaagatcatcgaggactgcagcaactctgaagagaccgtaaagctgcttcgcttcagc
tgctgggagaaccctcagttctcctccaccgtgctcagcgagctgctctggcaggtggcg
tactcctacacatacgagctgaggccttacctggacttgctgctacagatcctgctcatt
gaggactcctggcagacacacaggatccacaatgtgctgaagggcattcctgatgacaga
gacgggctttttgacaccattcagcgctccaagaaccactatcagaaacgagcctaccaa
tgtatcaagtgcatggtggccctatttagcaactgctctgtggcctaccagatcctacag
agtaatggcgatctgaaacgaaagtggacgtgggccgtggagtggctcggagacgagcta
gagaggaggccatatacagggaaccctcagtacacctacaacaactggtctcctccggtt
cagagcaacgaaacctccaacggctatttcctcgagcgttcacacagtgcacgtatgaca
ctcgccaaggcctgtgaactttgtcctgaggagctcaagtgtactcagggaagcccaggg
aaggagccagatgaacaggaagcacctgatgatcaagactcctccccacctgaggacacc
tctctgtacccacattctcctggaaccacccagtttcagcagaacaaccacccccatggg
cagccgtacaccgggcctgctgctcagcacatgaacaacccccagcgtcctggtcctgcc
tctgccccgactccaggccctacccagacccagacccagacccagacccccaccccagcc
cctggtcctactcccggcccgggcccgcgagcacaagagaactgggagagcaccgaggag
gtcgcccccgcccccacctctaccccagcgcctgccccgcctaaggagtaa
DBGET
integrated database retrieval system
