Scomber japonicus (chub mackerel): 128367574
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Entry
128367574 CDS
T09718
Symbol
hdac4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
128367574 (hdac4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjo03036
]
128367574 (hdac4)
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
128367574 (hdac4)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
128367574 (hdac4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
128367574
NCBI-ProteinID:
XP_053184145
LinkDB
All DBs
Position
11:8640798..8769328
Genome browser
AA seq
1117 aa
AA seq
DB search
MSSHSRQGGLNSKEQPLELLKPATLNHFVDVSTAALPTQVPPTTTAILPMDLRVVDHPHH
HHHHQQQTPFSLLPQPHPTPPASTACPASTEPGHGPVINHQEQQLQQELVSLKHKQQLQR
QLLIAEFQRQHEQLSRQHEAQLHDHIKHQQDLLALKHQQELLEHQRKMEQQRHEQELEKQ
QREHKLQQLKNKERGQESAVASTEVKMRLQEFVLNKKKALAQRNLNHCLPSDPRYWYGKT
QHSSLDQSSPPQTALSAYRHPMLGTYDSKDDFPLRKTASEPNLKLRSRLKQKVTERRSSP
LLRRKDGPITSAKKRSLDVAESACNSAPGSGPSSPNNSSSNIPNENGVTISSSPGEASLL
QRLAGREGSVSQLSLYTSPSLPNITLGLPATGPGSTVVSGHQDSESRLALCGLQQGIPLT
PPFLPTAHLPSYLASSALDREAAGGGTAGHSPLLQHMVLLEQSHSPIVGLAGLPLQSPSV
SKLARGHRPLGRTQSAPLPQQQCGQAQALQQLVVQQQHQQFLEKHKQQFQQQQQQHIINK
IMSKPSDQVSTASSSASGPGRQHQSHPEETEEELREHQGLSSSSSSSSSTSVPEAGPVRG
LVIKQEPPDPQEQEEREQRERQAEQELMFRQQALLLEQQRIHQLRNYRASMEAAGLSVSF
AGHRPLSRAQSSPASASFPMVVQEPPTKPRFTTGLVYDSLMQKHQCMCGNTTSHPEHAGR
IQSIWSRLQETGLRAHCECIRGRKASLEELQTVHSEAHVMLYGTNPLRQKLDCSVSPMFV
RLPCGGVGVDSDTIWNEVHSSSAARLAVGSVVELVFKVASGELKNGFAVVRPPGHHAEES
TPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYSDPSILYLSLHRYDD
GNFFPGSGAPDEVGTGAGVGFNVNMAFTGGLEPPIGDAEYLAAFRTVVMPIANEFAPDVV
LVSSGFDAVDGHAPPLGGYKLTAKCFGYLTRQLMALAGGRLVLALEGGHDLTAICDASEA
CVSALLGNELDPIPDEVLQQRPNANAVHSMEKVLEIQSKYWHSLQRSASTLGCSLSEVLR
RDAEEAETVSAMASLSVANKHIGKRAEEEPMEEEAPM
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgagctctcacagtcgacaaggtggcttgaacagcaaggagcagcctctggaacttctt
aaaccagctacgctcaaccatttcgttgacgtgagcacggcagcgctgcccacacaggtg
ccccccaccacgacagccatcctccccatggatctacgtgtagtcgaccacccccaccac
caccaccaccaccagcagcagacccccttcagtctgcttccccaaccccaccctactccg
cccgcctccacagcttgccccgcatctaccgagccgggccatggaccggtcattaaccac
caggagcagcagctgcagcaggagctggtgtcactcaaacacaagcagcagctccagaga
cagttactgatcgcagagttccagaggcagcatgaacagctgtcgcgacaacatgaagcc
cagctgcatgaccatatcaagcatcaacaggatttgctggcgttgaagcaccaacaagag
ctgttggagcatcagaggaagatggagcagcagcgtcatgagcaggagctggagaagcag
cagcgagaacacaaactgcagcagctcaaaaacaaggagagaggacaagagagcgcagtt
gccagtacagaggtaaagatgcgacttcaggagtttgtcctgaacaagaagaaagccctg
gctcagcgaaacctaaaccactgtctgcccagcgacccacgctactggtatggaaaaaca
cagcacagctccttggaccagagttctcctccccaaacagcattgtcagcgtaccgccac
ccaatgctgggcacatatgactcaaaagacgacttccctctccgcaaaacagcctccgag
cccaacctgaaacttcgttcgaggctaaagcagaaggtgacagagcgccgcagcagccct
ctccttcgcaggaaagacggtcccatcactagtgccaagaagcgatcccttgacgttgct
gagtctgcatgcaacagtgcaccaggctcaggtcccagctccccaaacaacagctccagt
aacatccccaatgagaacggggtcacaatctccagcagcccaggagaggcctccctgctt
cagcggttggctgggagggaaggttcagttagccagctctctctctacacctccccctct
ctgcctaatatcaccctgggactgccagccacaggccctggtagcactgttgtttcagga
caccaagatagtgagagtcgtctggcattatgtgggttacagcagggcattcctctgacc
cctcctttcctgcccactgcccacctaccctcttatttggcatcttcggctctggacagg
gaggctgctggagggggcacggctggtcacagccccctacttcaacacatggtactgctg
gagcagagccacagtccaatagttggtctggctggcctaccactgcaatcaccttctgtc
tccaagcttgcgcggggccaccgtcccctggggagaacccagtcggccccacttccccag
cagcagtgcgggcaggcacaagccctgcagcagctggtggtccagcagcagcaccagcag
ttcctggagaaacacaaacagcagttccaacagcagcagcagcagcacatcatcaacaag
atcatgtcgaagcccagtgatcaggtctcaactgcaagctccagtgcttcggggccaggc
agacagcatcagagtcacccagaggagacggaggaggaactcagggagcaccagggcctc
tcgtcctcctcctcgtcctcctcctctacctctgtgccggaggcagggcctgtacggggg
ctggtcatcaagcaggagcccccagacccacaggagcaagaagagagagagcagagagaa
agacaggctgagcaggagttgatgtttcgacagcaggctctgctgttagagcagcagcgg
atccaccagctgaggaattatagagcctcaatggaagcagccgggttgtcagtcagcttt
gccggacatcgccccctctccagggctcagtcatctccggcttcagcttccttcccaatg
gtggtgcaggagccgcccaccaagcctcgttttactacaggtctggtttatgactctttg
atgcagaagcatcagtgtatgtgtggtaacacaaccagccatccagaacatgccggtcgc
atccagagtatctggtcacgactacaggaaacaggcctgagagcacactgcgagtgtatc
cgcggtaggaaagcttcgttggaagagttacaaacagtccactctgaagcccacgttatg
ctgtatggaaccaacccactgcggcagaagcttgactgttctgtgagcccaatgtttgtg
aggttaccatgtggaggtgtaggggtggacagcgacaccatttggaatgaggtccattca
tccagtgcagctcgtctggccgtcggctcggtggtggagctggtattcaaagtagcgtca
ggagaactgaagaatggttttgctgtagtgcgaccacctggccaccacgctgaagagagc
acacctatgggattctgttatttcaactcggtcgccatagcagccaaactcctgcagcag
aggctcaatgtcagcaagatcctcatcgtagactgggatgtccaccatggtaatggcacc
cagcaggccttctacagtgaccccagcattctctatctgtcactgcatcgttatgatgat
ggaaacttcttccctggcagtggagcacccgacgaggttggcaccggagcaggtgtaggc
ttcaatgtgaacatggcgtttactggcggactggaacctccaataggtgatgcagagtac
cttgctgcattcaggacggtggtaatgcctatcgccaatgagtttgccccagatgtggtt
ctggtatcttcaggctttgatgcagtagacggacatgctccacccctgggaggatacaaa
ctgactgccaaatgctttggctacctgaccaggcagctgatggctctggcaggcggtcgg
ttggtgcttgccctggaggggggtcatgacctcactgccatatgcgatgcctccgaagcc
tgcgtctctgctctgcttggcaacgagttggatcccatccctgatgaggtgctgcagcag
agaccaaatgccaatgcagtccactcaatggagaaagttcttgaaatacagagtaaatat
tggcactcactgcagcgctctgcctctacacttggctgttctctgagtgaagtcctaaga
cgtgacgcagaggaagctgagaccgtctctgctatggcctcgttgtctgtggcaaacaag
cacattggaaaaagggctgaagaggaaccaatggaagaggaagctcctatgtaa
DBGET
integrated database retrieval system
