Scomber japonicus (chub mackerel): 128367610
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Entry
128367610 CDS
T09718
Name
(RefSeq) alsin-like
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjo03036
]
128367610
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
128367610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
MORN
VPS9
RhoGEF
PH
Motif
Other DBs
NCBI-GeneID:
128367610
NCBI-ProteinID:
XP_053184200
LinkDB
All DBs
Position
11:12250166..12280278
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AA seq
1634 aa
AA seq
DB search
MENREESPADERAPTPPERGLLHIWMSGGPKEQLCPERVLLSRCVLQIALGEHHGLLLAQ
GGQVFSFGELLWRGLSVPVSAPVLERSLLERMVVRVAAGGFHCGALSEQGNVYMWGENTA
GQCGLTERGTTSNITVSEPCPVTVVDNEVVPPAMVRVVDLACGREHSLALSAQNELWAWG
SGCQLGLVTNTFPVWRPQKVEHLAGRHVIQVACGAYHSLALVRSLPQQNYTTQKPPEKKE
RGQSPRYSLTEREEPLAVDDAHYCPLGVELSEVMTAETSRRKRSPRKRLQSRGRSAGSSP
GSGASLCPYFEDDKSNTKQKNLSTGTKLDADPLTAETDGLAATKSSTFPDQVELQNLLQK
LSGHSLETRQASGLGDTDSLSSQTSDDSYVSSTTSTDLFTSSYKEDSPMRSQTNNTSGVG
GVYSTSFPVCSEEVRLCLEKERQALQGQKSSSLTDISQRGQTGANRRRSLPGTPTHGSPR
RRRPCACRTPTAGRSQSAASEEVGDMMPSLETEVWSWGRGSEGQLGHGDQLARLQPLCIN
SLTGEEVIKIAAGSHHSLALTAQCQVYSWGSNMSGQLGHVNSPVTVPQQTKLSDSLRAWD
VSAGQSHSLLLADGDCVQPVLLYCGQQQETNSKSNQRSPSRAESYTVRPALLPFCMEMGY
ISSVCSGGQSCAVLADHNVMGFISAIHELASREREFYCWLSSVRKLLLTPLCNRESVCPS
LGEPCTQLFFSLCESLVRLSVLIGRHSTSLSYFLNDVQGRDITSLYLLTHTDHFLDIYKE
YCSSVGDFQVMGGFQSLHKLSLECLGSQQTKLAQLCVSDQSASENVDLVSLLYRPLQQLH
QYGRVLLKLAACYDVLTTEYQSLHQSSNQYESLSLSLMRKKKEAETTFLFWKTHSGKTTE
VLRLPKRRVVCESNNRSLTLQNAGRFSNHWFILFNDALVHTQFSTHHIYPLTCLWAKPIT
ENGSGLYAIKIKCPEESFTLVASTPQEKNKWLHSLNQEIDRVLGGGGQGSSPGQTAMSRT
ASYRFTGEGRFKDARYRGGWLAGQVHGRGNMEWADGRTYSGSFKNGQENGYGECIMPNKS
LSKPDTYQGHWKEGKIHGFGKYKYASGEVYEGCFCDGQRHGYGMLSSGKLARTSSSVFIG
QWVHDRKTGYGVHDDITRGEKYMGLWVDDQRHGSAVVVTQHCLYYEGTFKENKMSGSGLL
VSEDNTAFHGEFSDDWTVNGKGVLTLANSDYLEGMFSGEWTAGLKVVGTYYKPAVEGPEN
KDRNNLLRLGQYVVPADQRWSCVFDECWSRLGCDGAGRGERTTAWENIAVTITSARRYSS
NLSRSQTKILESLEFIPQHGEPVTTSNYDNIRRYLTKACETPHHPLGWLVETLVTVYRMT
YVGVGSNRRLLRQAVQEVQAYLTHFYSIVRFLFPGLPDDGGVIPNAPVSPSKSKHDSDTS
EQGYVVVVCCSSLLLPLLLPRLYPPLFTLYCLQEEPEETQYWDRILRLNKQPDQSLLSFL
GVHEKFWPVWMSILGEKKQIVSSSKDACFVSAVETLQQISTTFTPSDKLLVIQKTFEELT
QEVKPMLKGDFLWCMDDLLPLFLYVVLRARIRNLGAEVSLIEDLMDPNIQHGEMGLMFTT
LKACYIQIQQESTT
NT seq
4905 nt
NT seq
+upstream
nt +downstream
nt
atggagaatagagaggaaagccctgctgatgagcgggcccccacacctccagagcgagga
ctgctccacatctggatgtcggggggccccaaagagcagctttgcccagagagagtgctg
ctgtctaggtgcgtcttgcagatcgccctcggagaacatcatggactcctgctggcacaa
ggtggtcaagtgttttcttttggtgagctgttgtggagaggtctgagcgttccagtttct
gctccggtgcttgagaggtccctactggagagaatggtggtccgtgtggctgctggtggt
ttccactgcggagcgctgagcgagcagggcaatgtctacatgtggggggagaacactgcc
ggacagtgcgggctgactgagaggggcacaacctcaaacatcacagtttcagaaccgtgt
cctgtcactgtggtggacaatgaggtcgttcctccagcgatggtccgggttgtggatctg
gcctgtggacgggagcacagtctggccttgtcagcccagaatgagctgtgggcctggggc
agtggctgccagctcggcctggtcacaaacactttccctgtatggagaccacagaaggtg
gagcatttggcaggcagacatgtgatccaggtggcttgtggtgcctaccacagcttggct
cttgttcgcagtttacctcaacagaactacactacccagaaaccccctgagaagaaggag
cggggtcagtcacctcgctactcactgacggagagagaggagccccttgcagttgatgat
gctcactactgtccactgggggtggagctaagtgaagtcatgacagcagagacctctcgc
agaaaaagaagccccagaaaaaggctccaatctaggggaaggtcagctggcagcagccct
ggctctggagccagtttatgtccatattttgaagacgacaaatccaacactaaacagaaa
aatctttcaactggcaccaagcttgacgctgaccctctgacggctgagaccgatggcttg
gctgccactaaaagctcaacctttcctgatcaggtggaacttcagaatctcctccagaag
ctctctggtcactcattagagacacgacaagccagtgggcttggagataccgactcactg
agcagtcagacttcagatgacagctatgtctcttcaactacttccacggatcttttcacc
tccagttacaaagaagactcgccaatgaggagtcaaactaacaataccagtggagtgggc
ggggtgtactccacctccttccctgtgtgttcggaagaggttcggctttgtctggagaag
gagaggcaggcgcttcagggccagaagagctccagtctcacagatattagccagaggggg
caaacaggggcaaacaggagacgctccctgcctggaacacccacccatgggtctccacga
cgacggcgcccttgtgcctgcaggacacccactgctggtcggagtcagtctgcagcctca
gaggaggtgggagacatgatgccgtctctggagacagaagtgtggagctggggacgcggg
tctgaggggcaactgggccacggagatcaacttgcccgactccagcctctgtgtattaat
tctctgacaggcgaggaagtgataaaaattgccgcagggtcacaccattcattggctctc
accgctcaatgccaggtgtactcgtggggcagcaacatgtctggacagctcggtcatgtc
aacagtccggtcactgtcccacaacagactaagctgtctgacagtcttcgggcgtgggac
gtgtcagccggtcagagtcactccctcctcttggctgacggagactgtgtccagcctgta
ctgttgtactgcggccagcagcaagagacaaactcaaagtcgaatcagaggtcacccagc
agggcggagagttacacagtcagaccagcgctgctgcctttctgcatggagatgggttat
attagcagtgtgtgcagcggcggtcagagctgtgccgtgctggcagaccacaacgtcatg
ggtttcatctctgccatccatgagctggcttccagagagagagagttttactgctggttg
agcagcgtcaggaaattgcttctcaccccgctgtgtaacagagagagtgtgtgtccgtca
ttaggtgagccatgcacccagctcttcttctctctctgtgagagtcttgttcgtctgagt
gtcctgattggtcgacactccacgtcactcagctacttcctgaatgatgtgcagggccgt
gacatcacttccctttacctgctgacgcacacagatcacttcctggacatttataaagag
tattgttcttcagtaggtgacttccaggtgatgggtggatttcagtcactccataaactt
tcactcgagtgtttaggttctcagcagaccaagctcgctcagctgtgtgtttctgaccag
tctgccagcgaaaatgttgacctggtttcgttgttgtaccggcctttgcagcagcttcac
cagtacggccgagttctgctcaaattggcagcgtgctatgatgtgttaactacagagtat
cagtccctccatcagagcagcaatcagtatgagtctctgtctttgtccctgatgaggaag
aagaaggaggctgaaaccaccttcctcttctggaagacccactctggaaaaactactgag
gttctgcgtctcccaaagcgtcgcgtggtatgtgaaagcaacaacaggtcgctgactctg
cagaatgctggccgattttccaatcactggttcatactgttcaacgacgcattggtgcac
acacagttctccactcatcacatctatcctctgacctgtctgtgggcaaaacccatcacg
gaaaacggcagcggactctacgccatcaaaataaaatgtccagaggagagtttcaccctg
gtggcctcaacaccacaagagaagaacaagtggctgcactctctgaaccaggagatagat
cgagtgctgggcggtggaggtcaggggtcgtcaccaggacagactgccatgtctcggacg
gcctcgtacaggttcacaggagaaggaagattcaaagatgcccggtacagggggggctgg
ttggcaggacaagttcatggcagaggaaacatggaatgggcagacggtcggacctacagc
gggagcttcaagaacggacaggaaaacggctatggagaatgtataatgcccaacaaatca
ctgagtaagccagacacttaccaaggacactggaaagagggcaagatccacggcttcggc
aaatacaaatacgccagtggtgaggtgtacgagggctgtttctgtgatggccagcgtcac
ggttacggcatgctgagctccggtaagctggctaggacttcctccagcgttttcattggc
cagtgggtccacgacaggaagacaggatacggcgtccatgatgacatcaccagaggtgag
aagtacatgggactgtgggtggacgaccagagacacgggagtgctgtggttgttactcag
cactgtctgtactatgaagggactttcaaagagaacaagatgagtggttcaggacttctg
gtgtctgaggacaacacagctttccacggggagttttctgatgactggactgtcaacggg
aagggtgttttgacactggcaaacagtgactatttagagggcatgttcagtggagagtgg
actgcaggtctgaaggtggttggaacatattacaaaccagctgtcgaaggaccagaaaac
aaagacagaaacaacctgctcaggttgggtcagtatgtggtgcctgcagatcagaggtgg
agctgcgtttttgatgaatgttggagtcgactgggctgcgatggtgccggcagaggagag
cggacgacagcctgggagaacatcgctgttactattacaagtgcacgccgttacagctct
aacctcagcaggtctcagaccaaaatattggagagtttggagtttattcctcagcacgga
gaaccagttaccacctcgaactatgacaacatacgaagataccttaccaaggcctgtgag
acgccccaccatcctctaggctggctggtcgagacgttggtgacagtctacaggatgaca
tatgtcggtgttggatccaaccgcaggctactcaggcaggctgttcaggaggtccaggcc
tacctcacacatttctacagcattgtgaggtttctgtttcctgggttaccagatgatggc
ggcgtcattccaaacgcccccgtctctccatccaaaagcaaacatgactcggacacatca
gagcaaggttatgtcgtggtggtgtgctgctcctctctgctcctccctctgctgcttcct
cgactctaccctcctctctttaccctgtactgcctgcaggaggagccggaggagacccag
tactgggatcgcatcctccgcctcaacaaacagcccgatcagtcactgctcagcttcctg
ggagtgcacgagaagttctggccggtgtggatgtcgattttgggagagaaaaaacagatc
gtatccagcagtaaggatgcctgctttgtttccgctgtagagacactccaacaaatcagc
accaccttcactccatcagacaaactgctggtcatccagaagacgtttgaggagttgacg
caggaagtgaagcctatgctgaagggtgacttcctgtggtgcatggatgacttgctccct
ctcttcctttatgtggtgctcagggcgaggatcaggaacctgggagcggaggtgagcctg
atagaagatttgatggatcccaacattcagcatggagagatgggactgatgttcaccaca
ctgaaggcctgctacattcagatccaacaggagtcgaccacatag
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