Scomber japonicus (chub mackerel): 128367614
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Entry
128367614 CDS
T09718
Symbol
sox21b
Name
(RefSeq) transcription factor Sox-21-B
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128367614 (sox21b)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128367614 (sox21b)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
128367614
NCBI-ProteinID:
XP_053184204
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Position
11:18639105..18639851
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AA seq
248 aa
AA seq
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MSKPMDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLMKKDKFSFPVPYNLGEHDALKVNGLTAGALSESV
LGNPDKAAAAAAAAAARVFFNPSMSTNPYSFFDLGSKMTELSPHSFPYASPLGYPPGGAT
AFTGTGSVGGGTHTHTHSHPSPGNPGYMIPCNCTTWPSAGLQPPLAYILLPGMGKPQLEP
YPAYAAAL
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagccaatggatcacgtcaaacgcccgatgaacgctttcatggtttggtccaga
gcccagcgaagaaaaatggctcaggaaaacccgaaaatgcacaactccgagatcagcaag
aggttgggagcggagtggaaacttctcaccgagtctgagaaaaggccattcattgacgaa
gccaaacggctgcgagcgatgcacatgaaggagcacccagactataaatacagaccgagg
cggaagcccaagactctgatgaaaaaagataagttttctttcccggtgccctacaatctc
ggagagcacgacgcgctcaaagtgaacgggcttaccgctggagcactttccgagtccgtc
cttgggaaccctgataaggcagcagcggcggcagcggccgcagcagccagagtgttcttc
aacccatccatgtccacgaacccttattcctttttcgacctgggatccaagatgactgag
ctttccccgcattcgtttccgtacgcgtctccgttgggctacccgccgggaggcgccacg
gctttcaccgggactggcagtgtaggtggcgggacgcacacccacactcactcacacccg
tcccctggaaacccgggctacatgatcccctgtaactgtacgacctggccctcagcagga
ctccagccgcccttagcatacatcctcctgcccggcatgggaaaacctcaacttgaaccg
taccctgcatatgctgcggcgttatga
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