Scomber japonicus (chub mackerel): 128367727
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Entry
128367727 CDS
T09718
Symbol
ptprdb
Name
(RefSeq) protein tyrosine phosphatase receptor type Db isoform X1
KO
K06777
receptor-type tyrosine-protein phosphatase delta [EC:
3.1.3.48
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128367727 (ptprdb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sjo01009
]
128367727 (ptprdb)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sjo04515
]
128367727 (ptprdb)
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
128367727 (ptprdb)
Protein phosphatases and associated proteins [BR:
sjo01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
128367727 (ptprdb)
Cell adhesion molecules [BR:
sjo04515
]
Immunoglobulin superfamily
Type II RPTP family
128367727 (ptprdb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
Ig_3
I-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
PTP-SAK
ig
Tc-R-P
DSPc
Y_phosphatase3
PTPlike_phytase
PTP-NADK
Interfer-bind
V-set
Ig_5
Ig_C17orf99
Insulin_TMD
Glyco_hydro_46
Motif
Other DBs
NCBI-GeneID:
128367727
NCBI-ProteinID:
XP_053184320
LinkDB
All DBs
Position
2:22562096..22605871
Genome browser
AA seq
1367 aa
AA seq
DB search
MGPQLKVVERSRTATMLCAASGNPDPEITWFKDFLPVNTSNNNGRIKQLRSGALQIEMSE
ESDQGKYECVATNSDGTRYSTPANLYVRVRRVPPRFSIPPADSEIMPGGNVNITCVAVGS
PMPYVKWMLGAEDLTPEDDMPIGRNVLELTDVRQSNNYTCVAMSTLGVIEAVAQIIVKAL
PKAPGTPVVTERTATSITLTWDSGNPEPVSYYIIQHRAKGSEDPYKEIDGIATTRYSVGG
LSPYSHYDFRVAAINTIGQGPSSEVVEARTAEQAPSSPPRQVRGRMLSTTTAIIHWDEPE
EPNGQVVGYRVYYTSDNTLPVNQWEKQMVRSANFITIQGLTPNKTYYIRVLAFTSVGDGP
LSQDLQIIAKTGVPSQPSEFKGEAKSETSILLSWVAPPQGGPDNQITGYELVYRRADDTE
EKKVSFEPTTSYMLKNLKPFSTYTFQLAARSKHGIGAYTNEVSIDTPQTLFATNFRVKAA
MKNSVLLSWEIRDKNPAQPFTILYGKGLSVEVDGKQTQKLITGLEPDTQYSFLLTNRANS
AGGLQHRVTATTAPDILKTKPTVVGKTNADGMVTVQLPTVQTTAKVRGYYVVVVPLKKQR
GGKFLNPWEEPDQMNMDELLKEINRTSVSRALRVRRQTGQSDPKAYVTAHFKFLPLEFTL
GDGRNYGDFRNRPLQNGQEYVFFVLALLDLSENTMFATSPYSDPVTSSDVDPQPIIDEEE
GLLWVVGPVLAVIFIVCIVIAILLFKRKRAEAEGRKGSFPCSKAMSSHHPTDPVELRRIN
FQTPGMASHPPVPISELADHIERLKANDNLKFSQEYESVDPGQQFTWENSNLEVNKPKNR
YANVIAYDHSRVILSSIEGVPGSDYINSNYIDGYRRQNAYIATQGSLPETFGDFWRMVWE
QHTANIIMMTKLEEKSRVKCDQYWPTRGTETYGLIQVTLLDTVELATYSVRTFALYKSGS
NEKREVRHFQFTAWPDHGVPEHPTPFLAFLRRVKACNPPDAGPMVVHCSAGVGRTGCFIV
IDAMTERIKHEKTIDIYGHVTLMRSQRNYMVQTEDQYIFIHDALLEAVTCGTTEVPARNL
YSYIQRLTQIEPGENVTGMELEFKRLASAKAHTSRFVSANLPCNKFKNRLVNIMPYETTR
VCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDYWRMLWEHNSTIVVMLTK
LREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTVRQFQF
TDWPEQGVPKSGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMR
YEGVVDIFQTVKMLRTQRPATVQTEDQYQFCYRASLEYLGSFDHYAT
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgggtccccagctgaaagtggtggagcgttctcggactgccaccatgctttgtgctgct
agcggcaaccctgacccggaaattacctggttcaaggatttcctgccagtcaacacatcc
aataacaatggacgaatcaagcagctccgctcaggtgcactccagatagagatgagtgaa
gagtcagaccaggggaagtatgagtgtgttgccaccaacagtgatgggacacgctactcc
accccagctaacctgtatgtcagagtacgtcgtgtcccccctcgcttctccataccccca
gcagacagcgagatcatgccaggggggaacgtcaacatcacctgtgtggctgtgggctcc
cccatgccgtatgtgaagtggatgctgggagctgaagacctgacccccgaggatgacatg
cccattggccgtaatgtcctcgaactgactgatgtgcgccagtccaacaattacacttgc
gttgccatgtcaacgcttggcgtgattgaggcagtggcacagatcattgtgaaagctctt
ccaaaggctcctggcacccctgtggtgacggagagaactgcaacaagcattactctcacc
tgggattctggcaaccctgaacctgtctcctactatatcatacagcaccgtgccaagggc
tccgaagacccatataaagagattgatggcattgccacgacgcgctacagtgtgggcggc
ctcagcccttactcccactatgacttccgtgtggcagccattaacaccattggacagggc
ccctccagcgaggtggttgaggctcggacagctgagcaggccccctcctcccctccacga
caggtcagaggtcgtatgctgagcaccacaacagcaatcatccactgggatgaaccagag
gaacctaacggacaagttgttggttacagagtctactacacctcagataacacactgcca
gtcaaccagtgggagaagcagatggtgcgcagcgccaactttatcactatccagggtttg
acaccaaataagacttattatatcagggtgctagccttcacctctgtaggggacggacct
ctgtcccaggacctgcagatcatagccaagactggagttccatctcaaccttcagaattt
aagggggaggcaaagtctgagaccagtatcctgttgtcctgggtggctccaccccagggc
ggccctgacaaccagatcacaggatatgagctggtttaccgacgagctgatgacacagag
gagaagaaagtgagctttgagccaaccacttcgtacatgttgaagaacctgaagcctttc
tccacgtacaccttccagcttgctgccagaagcaaacatggaattggtgcatataccaac
gaagtgtccatcgacacgccacagacgctttttgccaccaacttcagagtaaaggctgcc
atgaagaactctgtcctgctgtcctgggagatccgagacaaaaaccctgcccagcctttc
actatcctttatggaaagggcctgtctgtggaagtggatgggaagcagacacagaagctg
atcactggcttggagcctgacacccagtactcctttctgctcaccaaccgggccaacagc
gctgggggcctgcagcaccgtgtcaccgccaccactgctccagatatcctgaaaactaag
cccactgtggtgggaaagaccaatgctgatggcatggtgactgtgcagctaccgactgtg
cagaccacagctaaagtcaggggttactatgtggtggttgtgccactgaagaagcagcga
ggaggaaagttcttgaatccctgggaggagcctgaccaaatgaacatggatgagctcctg
aaagagatcaacaggaccagtgtcagtcgtgccctccgcgtccgcagacaaactggccaa
tctgatcccaaagcttatgtcactgctcactttaaattcctccccttggagttcaccctc
ggtgacgggcgaaactacggagacttccgcaatcgtccactgcagaacggacaagaatat
gttttctttgtgcttgcactgctagacctctctgagaataccatgttcgccaccagccct
tattctgatcccgtaacctcatcggatgtggatcctcagccaatcattgacgaggaggag
gggctgctgtgggtggtgggtcctgtgctggctgtcatcttcatcgtctgcattgtgatc
gccattctcctctttaagaggaaaagggctgaggcagagggcaggaagggcagttttccc
tgcagcaaagccatgtcgtcacaccatcccaccgatcccgtggagctacgcagaatcaac
ttccagactccaggcatggcaagtcacccacccgtccccatctctgagctggcagatcac
atcgagcgcctcaaggcaaacgacaatctcaagttctctcaagagtacgagtctgtcgac
cccggtcagcagttcacgtgggagaactccaacttggaggtcaacaaaccaaagaaccgc
tatgctaacgtcattgcctatgatcactccagggttatactctccagtattgagggtgtc
cccggcagtgactacatcaactctaactatattgatggctaccgccgtcagaatgcctac
atcgccactcagggctccctccctgagacctttggggacttctggaggatggtctgggag
cagcatacagccaacattattatgatgaccaaactggaagagaagtcacgggtgaagtgt
gatcagtactggccaacgcggggcacagagacctacggcctcatccaggtcacgctgctt
gacacagtggaactggctacctactctgtcaggaccttcgctctttacaagagtggctcc
aatgagaagcgtgaggttcgtcacttccagttcacagcctggccagaccatggggtacca
gaacaccccacacccttcctggccttcctacgcagggtcaaggcctgcaaccctccagac
gcaggacccatggttgtccattgcagtgctggagtgggccgcacaggctgcttcattgtg
atcgacgccatgacggagcgaatcaagcatgagaagaccattgacatctatggccatgtc
acgctgatgcgctcccagaggaattacatggtccaaacggaggaccagtacatcttcatt
cacgatgcgctgctggaagccgtgacctgtgggaccacagaggtccccgctaggaacctg
tactcgtacatccagaggctgacgcagattgaacctggagagaatgtcaccggcatggag
ctggagttcaagcgtctcgccagtgccaaggcccacacatcacggtttgtgagtgccaac
ctgccatgcaacaagttcaagaatcggctggtgaacatcatgccctacgagactactcgt
gtctgtctgcagccgatcagaggagtggagggatccgactatatcaacgccagcttcatt
gatggatacaggcagcagaaggcctacatagcaacccaaggcccactggctgagaccaca
gaggactactggaggatgttatgggaacacaactccaccatagttgttatgctaaccaaa
ctgagagaaatgggacgggagaagtgtcaccaatactggcctgcagagcgctcagccagg
taccagtactttgtggtggatcccatggccgagtacaatatgccccaatacatcctccga
gagttcaaagtcactgatgccagagatggccaatcacggacagttcgccagttccagttc
actgattggccagagcaaggagtgccaaagtcaggggaaggattcattgatttcattggt
caagtgcacaaaactaaagaacagtttggccaggatgggccaattactgtgcattgcagt
gctggagtggggagaactggtgtgttcataaccctgagcatcgtgctggagaggatgagg
tacgagggagtggtggacatcttccagactgtgaagatgctgcgcacccagagacctgcc
accgttcaaacagaggaccagtaccagttctgctaccgggccagtctggagtacctggga
agctttgatcactatgcaacataa
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