Scomber japonicus (chub mackerel): 128367793
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Entry
128367793 CDS
T09718
Symbol
itgb2
Name
(RefSeq) integrin beta-2 isoform X1
KO
K06464
integrin beta 2
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04145
Phagosome
sjo04514
Cell adhesion molecules
sjo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128367793 (itgb2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128367793 (itgb2)
09142 Cell motility
04810 Regulation of actin cytoskeleton
128367793 (itgb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128367793 (itgb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128367793 (itgb2)
04515 Cell adhesion molecules [BR:
sjo04515
]
128367793 (itgb2)
04090 CD molecules [BR:
sjo04090
]
128367793 (itgb2)
Membrane trafficking [BR:
sjo04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
128367793 (itgb2)
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128367793 (itgb2)
Cell adhesion molecules [BR:
sjo04515
]
Integrins
Integrin beta subunits
128367793 (itgb2)
CD molecules [BR:
sjo04090
]
Proteins
128367793 (itgb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
EGF_integrin
vWA_SIBA-E
I-EGF_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
128367793
NCBI-ProteinID:
XP_053184416
LinkDB
All DBs
Position
11:31432449..31456097
Genome browser
AA seq
779 aa
AA seq
DB search
MDRHLLLLLIVMARNGLCQNGESCSKSVVNSCSDCIKSGPDCVWCQKLNFTKAGEQEAAR
CDTKAKLMDRGCEAEDIISPENKLTVVKKVPLSQSFNQQEPIQLSPQTIELKLRPGLPHK
FTVSFKRVEGYPVDLYYLMDLSNSMKDDLENIKNLGKDLFAALKSITEHGQIGFGAFVDK
TVLPYTNTNEEKLRRPCDETDQYCQAAFGYRHVLSMTPSEDEFKEKVTEQFISGNLDSPE
GSLDAMMQAAVCGEKIGWRNSSTRLIVLTTDDGFHMAGDGKLAGILEPNDEACHMQNNLY
VKSSEMDYPSVGQLVMQLKKNNIQPIFAVTKKTKTVYQQLSDMIPKSVVGVLSEDSKNVV
DLINNAYRSLSSKVTLTHENLPDNVRVVYTPKCEHPESAQDNKGVCNNVPAGTQISFDVT
LTADSCMEDTSFTIRPLGIKDTLTVSLSTICECVCKNHTDVSGSAYCNSHGKIQCGICSC
KDGYVGQACECSTDEREERAKRASCQKSNNTQECEGRGDCVCGRCRCHTTESGNSYHGDY
CECDDESCEKFQNQLCGGHGECKCGDCICDADFEGSACECRKSDQACRTPDNTVCYGRGK
CKCNRCECEGGYQRPNCQKCIGCPDSCQTKLNCIECLGFESGPFKKNCTVACSSILHYQM
VDRLTLSSKECKQKDSEGCWIKFKLDQLVGKDNYTAEIQKQKECPEPPSVTAIIGGSVAG
VAVIGILLLMLLKLLIYMKDMKEWKKFENEKKKSKWAEADNPLFQDATTTVTNPTFTGE
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggatcggcatttgttacttcttttaatcgtcatggccaggaatggactgtgtcaaaat
ggggaaagttgctcaaagtctgtggtcaactcctgcagtgactgtatcaaatctgggcca
gactgtgtgtggtgccagaagctgaatttcaccaaagcaggtgagcaggaagcagcccgc
tgtgacaccaaggctaaattgatggacagaggctgcgaggcggaagacataatttcccct
gaaaacaaactaacagttgtcaagaaagtgcctctgtctcagtcattcaaccagcaggag
cctatccagctgagtccacagacgattgagctgaaactgcgacctgggcttcctcacaaa
ttcactgtttctttcaaaagagttgagggttatccagttgatctctactacctgatggac
ctgtctaactccatgaaagatgacctggaaaatatcaagaatttgggaaaagatcttttt
gcggctctgaaaagtattactgaacatggacaaatagggtttggtgcatttgttgataag
acagtccttccttacactaacaccaacgaggagaaactgcgaaggccatgtgatgagact
gaccagtactgtcaggctgcctttggctacagacatgtgcttagtatgacaccaagtgag
gatgagttcaaggaaaaagtgacagagcaattcatttctgggaacttggactctcctgaa
gggagtcttgatgccatgatgcaggctgccgtatgtggggaaaaaataggctggaggaac
agcagcactcggctgattgtcctgactactgatgatgggttccacatggctggggatgga
aaattggccggtatactggagccaaatgatgaagcttgccacatgcaaaacaacctttat
gtcaagagcagtgagatggattacccatctgttggacaactagtaatgcagttgaagaaa
aacaatatccagccaatatttgcagtgacaaaaaagactaagactgtgtaccagcaactc
tctgacatgattccaaaatctgtggtgggagttctgtcagaagattctaaaaatgttgtt
gacttgattaacaatgcctacagaagtctgtcctccaaagtaactttgacccatgaaaat
ctcccagacaatgtaagagttgtctacacccctaaatgtgagcatcctgaatcagcacag
gacaacaagggagtatgtaacaatgtccctgcaggaacacagatttcctttgatgtcact
ttgacagcagactcatgtatggaggacacgtctttcactatcagaccacttggaattaaa
gacacgttgacagtttccttgtctacaatctgtgagtgtgtttgtaaaaatcacactgat
gttagtggctcagcatactgcaacagccacggaaaaatccaatgtggtatttgtagctgc
aaagatggctatgttggacaggcctgtgaatgctccactgacgaaagagaggagcgcgcc
aagcgagcatcctgtcagaagtcaaataacacacaggagtgtgagggtcgaggagactgt
gtatgtggcaggtgcaggtgccataccacagagagtggaaatagttaccatggtgattac
tgtgagtgcgatgatgaaagctgtgagaagttccagaatcaactatgtggaggacacggt
gaatgcaaatgtggtgactgtatatgtgacgcagactttgagggctcagcctgtgagtgt
aggaagtctgaccaggcctgtcgtacccctgacaacactgtgtgctatggcagagggaaa
tgcaagtgtaaccgctgtgagtgtgagggggggtaccagcgcccaaattgtcagaaatgc
attggctgcccagactcctgccagaccaaattgaactgcattgagtgccttgggtttgaa
tcaggtcccttcaaaaagaactgcacggttgcttgcagcagtatccttcattatcagatg
gtagaccgtcttaccttatcaagcaaggagtgcaagcagaaggactcagagggctgctgg
attaaatttaaactggatcagttggtcggtaaggacaactacacggctgaaattcagaaa
caaaaagaatgtccggaaccacccagtgtcacagcaatcatcggaggctccgttgcgggc
gtggctgtcattggcatcctgctgctgatgctgctcaaattactaatttatatgaaggac
atgaaagagtggaagaaatttgaaaatgaaaagaagaaatccaagtgggcagaggctgat
aacccactgttccaggatgccaccaccactgtaaccaatccaaccttcactggagaatga
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