Scomber japonicus (chub mackerel): 128367824
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Entry
128367824 CDS
T09718
Symbol
wdr75
Name
(RefSeq) WD repeat-containing protein 75
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
128367824 (wdr75)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sjo03009
]
128367824 (wdr75)
Ribosome biogenesis [BR:
sjo03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
128367824 (wdr75)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR75_2nd
Beta-prop_WDR75_1st
WD40_WDHD1_1st
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IP5PC_F
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WDR90_beta-prop_4th
PEP5_VPS11_N
Beta-prop_HPS5
NBCH_WD40
Vgb_lyase
DUF1623
Piezo_TM1-24
DUF702
THSD1_N
Motif
Other DBs
NCBI-GeneID:
128367824
NCBI-ProteinID:
XP_053184453
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Position
11:complement(6116642..6146514)
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AA seq
840 aa
AA seq
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MVEHGEIRVVHRGGSKINFREPVITSDSKFLLCASGECVKVFSTSTEECIHDLRGHTDLV
TGVLIRPTNHLQAYTCSVDGTVRVWDFTDGILIKTYVIGCPIYSIYASENHNGVVFIVTP
TLGEKRSELFQLVALHLPQSGDQLVEARELSAVLADVSSNPEAIAFGRGGEFIASAKGLQ
LECYFFKKQKSYRFSLKEDNKKGGKNTFTCITCHPKDDCIATGHEDGKIRLWRNINHKKE
YTYSTLHWHHSAVSSLSFTPEGTNLLSGGEESVLVQWKYNQESQRDFLPRLGAAITHITV
SPDGALFCTSHADNKITIIQSCVKVSAVIQGLVKGESLRSDLMVDPRSKALVLNGKPGHL
QFYSLQRDKLLFNLDIVQQEYIHQSGLQQFEVVKAAFDASGNWLATVEERKQKAAELELN
LKLWAFDEQTQSFVLNTTISAPHESRITAMCFCRAADNQTTMLVSTSKDGHFKAWQLAAP
AHTDDEGPSWSCDFVGAYHSLAPECCCFSADGSLLAVSFQEVVTVWSPASWELLTTLSQP
PGAIRDLCFGRLSCSKYLLGTTEKNLLCCWNLLTCSLEWSTSMDVSLLLADPVSENMAAF
CFQDGCTDLFVFKPSEPRPLFSQKAVCSGKVTRAVFAPREEMLESCEESCQWLNCSQLYF
ISQYMDLLTFTSKAEEERLMASSKQLVVDDSVAMTPFYLLLGKHRQQQEQNQDSLSILSA
GRERLPQGSVAIKELLQTPAHVLPSTSFLCSMFVQSLLISVTDDREEKQHTEEEMESEKE
EEDSEEEMESSTSRPKEAPSAGDRAAADSSEAPPLTKAQARELRRVKKLDHSWLSSVLDC
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggtggagcacggggagatccgcgtggttcacagaggaggcagtaaaataaactttaga
gagcctgtcatcaccagcgactccaagtttttgctatgtgcctcaggagaatgtgtgaag
gtgttcagcacctccacagaggagtgtatccacgacctgcgcggacacaccgacctggtc
acaggtgtgctgatcagaccgacgaaccacctgcaggcttatacttgttcagtagacggc
actgtccgggtttgggacttcacagatgggattctcattaagacttatgtcatcggctgc
ccgatttactccatctacgcctctgaaaaccacaatggagtcgtcttcatcgttacccca
acgctaggtgaaaaaagatctgagcttttccagctggttgcgttacatctgccgcagagt
ggagatcagctggtggaggccagagagctttctgctgtgctcgccgacgtcagctccaac
ccggaagccatcgccttcggccgagggggagagttcatcgcctcggctaaaggtttgcag
ctggagtgttatttcttcaagaagcagaagtcatacaggttttccctcaaagaagacaac
aagaaaggaggtaaaaacacgttcacatgcatcacctgtcacccaaaggacgactgcatc
gccacgggacacgaggatggaaagattcgtttgtggagaaacatcaaccataagaaggag
tacacatactcgactctgcactggcaccacagcgctgtcagctcactgagcttcactcca
gaaggaaccaacctgctgagcggaggcgaggagtccgtgctcgtccagtggaaatacaac
caggagagccagcgggacttcctgcctcgcctcggagccgccattactcacatcaccgtc
tcacctgacggagcgctgttctgcacctcacatgcagacaacaaaatcacgatcatccag
agttgtgtgaaagtgtcggccgtcattcagggtttggtcaaaggagaaagtctccgctca
gacctgatggtggatccacgcagcaaagctctggtgctgaacgggaaacctggacacctg
cagttttactcgctccaaagagacaaactactgttcaatctggacattgtgcagcaggag
tacattcaccagtcgggcctgcagcagttcgaggtggtgaaggcggccttcgacgcctcg
ggcaactggctggcaacggtggaagaaagaaaacagaaggcggccgagctggagctgaat
ttaaaactgtgggcattcgatgaacaaacacagagttttgtgctgaacacgaccatctcg
gccccccacgagagccggattacagccatgtgcttctgccgcgccgccgacaaccagacc
accatgctggtctccaccagcaaggacgggcacttcaaagcctggcagctggcagctccg
gcccacacagacgatgaaggtccgtcctggtcgtgtgattttgtcggagcctatcacagc
ctggcgcctgaatgctgctgtttctcggccgatggctctctgctggccgtcagctttcag
gaggtggtgactgtgtggagcccggcctcctgggagctcctgacaacgctttcccagccg
ccgggagcgatcagagatctttgttttgggcgactgagctgctccaaatatctgctggga
actacggagaagaatctgctctgctgctggaacctcctcacctgctccctggagtggagc
acctccatggacgtcagcctgctgctggccgaccccgtctctgaaaacatggccgccttc
tgcttccaggacggatgcacagacttgtttgtctttaagcccagcgagcctcggccgctg
ttttcccagaaggccgtgtgttcggggaaggtgactcgggccgtctttgccccgagggag
gagatgctggagagctgtgaggagagctgccagtggttgaactgctcccagctctacttc
atctctcagtacatggacctcttgacgttcaccagcaaggcggaggaggagcggctgatg
gcgtccagcaaacagctcgtggtcgatgacagcgttgccatgacgccgttctacctgttg
ctggggaaacaccgacagcaacaagagcaaaatcaagactcgctgagcatcctgtctgct
gggagagagcgtctccctcagggctccgtcgccattaaagagctcctgcagacgccggct
cacgtcctgccctccacctctttcctctgctccatgttcgttcagtctctgctcatctcg
gtcacagacgacagagaggaaaaacaacacacagaggaggaaatggagagcgagaaagag
gaagaggattcagaggaggaaatggagtccagcacttcgagaccgaaggaggcgccgtca
gctggagaccgggcggcagcagattcgtctgaagctccacctctgacaaaagctcaggcc
agagagctgaggagggtgaagaaactcgaccacagctggctcagcagcgtcctggactgc
taa
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