Scomber japonicus (chub mackerel): 128367825
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Entry
128367825 CDS
T09718
Symbol
stxbp5l
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128367825 (stxbp5l)
Membrane trafficking [BR:
sjo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
128367825 (stxbp5l)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
128367825 (stxbp5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
WD40
Beta-prop_RIG_2nd
WD40_Prp19
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
EIF3I
Lgl_C
Beta-prop_WDR19_1st
Synaptobrevin
Beta-prop_VPS8
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
128367825
NCBI-ProteinID:
XP_053184454
LinkDB
All DBs
Position
11:complement(11109113..11258457)
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AA seq
1183 aa
AA seq
DB search
MKKFRKVLDGLTTSSPGGTIGSPSCGSAAGTPTAAPTPKDIDVQETLVSENFQLCKTVRH
GFPYQPTALAFDPVQKLLAIGSRSGGVRILGRPGVDCYCQHESGAAVLQLQFLINEGALV
TACADDTLHLWNLRQRRPAILHSLKFNRERITFCHLPFQSKWLYVGTERGNTHIVNIESF
ILSGYVIMWNKAIELSTKTHPGPVVHLSDSPKDEGKLLIGFESGTIVQWDLRVKKVDFRI
YYDEAIHSVGWHHEGKQFMCSHSDGSLTMWNLRNTTKPFQVTFPHGKIQKDGRKESCKPI
LKVEYKTSRNSEPFIIFSGGLSYDKAGRRPTLTIMHGKAITVLEMDYPIVEFMALCETPY
NNEVQEPYAVVVLLEKDLIVVDLTQSNFPVFENPYPMDIHESPVTCTAYFAECPPDIIPI
LYSIGAKHKKTGYSQKEWPVSGGTWTLGSHTYPEIIVTGHADGSIKFWDASAITLQMLYK
LKTSKVFEKPKLGEGRAAELVEEDPFAVQMVSWCPQSRIFCVVGISAHIILYRFSRYDAN
TQIVSLELRLQCESEDVNSPSENENTPCFSEPGSHSPQPHQQPASPGSRTPEGVKDSIPC
LKVKDRVVRVPPGYQAELVIQLLWTDGDPPQQITSLDINSAYGLLAFGNCNGLAVVDYLQ
KTILLCMSTLDLYGTADPYQRLTRSPRRNRQFCLLAQNFCMRGLSNFYSDSKKRIRTSYQ
SLTELSDNQQSIDMERSKSPTSDHVNGHCTSPTSQPCSAGKPRIPMGPEGPRLTRRGPGR
PPFRKAQSAACMEISLPVSHTEESRENSFSRSRSSSVSSIDRDTKEAITTLQFGESYGRK
SDALPTPCLWVGTSLGVVLLIPMSVPTEQEERMEESVTIGPSGMVLMLKGSVLRFGFLDC
MGAHIQSPYEVWRDLNAPEDPDRPRRRKLVNFSPSSSQDACGEGHLAVVCSERQAKVFLM
PSQSCLFVHNITESSFVLRADIVSVSNSVCLACFCANGHVMTLSLPSLRPMMDVNYLPMT
DMRIARTFCFTNGGQALYLSSPTEIQRVTYSQEMCDNLQEMLGELFTPTETPEAQNRGFL
KGFFGGNAQTFDREELFGEAAAGKASRSLAQHIPGQVGMEGMKVAATGVVGELARARIAL
DERGQRLGELEDRTALMMTSAETFSKHAHELMLKCKDKKWYQF
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttcggaaggtgttggacggtttgaccacctcctctccaggggggactatc
ggatctccatcgtgtggcagcgcggccgggactcccaccgcggcgccaactcccaaggat
atcgacgtccaagagacgctggtgtcggaaaactttcagctgtgtaagacggttcgtcat
ggtttcccttaccagcccactgctttggcctttgaccctgtgcagaagctcctggccatt
ggctccagatcaggcggagtacggatattgggacgacctggggtggactgctactgtcag
catgagagcggagcagctgttcttcaactgcagttcctcatcaatgagggggcgttggtc
acagcctgcgcagacgacacgctacacttgtggaatctgcgtcagaggcggccagctatc
ctgcattcactcaaattcaacagagagaggatcacattttgccaccttcccttccagagt
aaatggctgtacgtcgggacggagcgcggaaacacacacattgtcaacatcgagtccttc
attttgtcgggatatgtcatcatgtggaataaggccattgaactatcaactaaaactcat
ccaggacctgtggttcatttgagcgacagcccgaaggatgaaggcaagctgcttattggg
tttgagagtgggacgattgtacagtgggacctcagggtcaagaaggttgacttcagaatc
tactacgatgaggccatccattcagtcggctggcatcatgaagggaagcagttcatgtgc
agtcactcagacggcagcctgaccatgtggaacctcagaaacaccaccaagccattccag
gtcaccttcccgcacggaaagatacagaaggatgggaggaaggagtcgtgtaaaccgatc
ctcaaagtggagtacaagacctccaggaacagtgagccttttatcatcttctctgggggt
ctttcttatgacaaggcaggacggcggccaacattaaccattatgcacggcaaagccatc
actgtgctggagatggactatcccatcgtagagttcatggccctctgtgagactccttac
aacaacgaggtccaggagccatatgcagtggtggtgcttttggagaaggacttaattgtg
gtggatctgacacagagcaactttcctgtctttgagaatccttaccccatggacatccac
gagtctccagttacctgcacagcctactttgcagaatgtcctcccgacattatccccatc
ctatactccataggagctaaacacaagaagactggatacagccaaaaggagtggccagtt
agtggagggacgtggacgttaggctcccacacctacccagagatcatcgtcacaggacat
gctgatggatcaattaagttttgggatgcatctgcaatcacactacagatgttgtacaag
ttgaagacctccaaggtgtttgaaaagccaaagctgggtgaaggccgggctgccgaactg
gtggaggaggacccttttgctgttcagatggtcagctggtgcccccagagtcgcatcttt
tgtgtagtcggcatctcagcccacatcatcttgtatcgcttcagcagatacgatgctaac
acacagatagtgtcactagagctgcgtctgcagtgtgagtcagaggatgtcaactctcca
tcagagaatgaaaacactccctgcttctcagagcccggctctcactcaccccaaccccac
cagcagccagcaagccctggcagcaggacaccagagggtgtcaaagacagcatcccctgt
ctcaaggtgaaggaccgggtggttcgtgtgccccctggctaccaggcagaactggttatc
cagctgctgtggacagatggagaccctccacaacagatcaccagcttggacatcaactct
gcctatggccttttggcatttgggaactgtaatggcctagcggtggtggactacttgcag
aaaaccatcctcttgtgtatgtcgacactggatctatatggaaccgctgatccctaccag
cgccttacccgctccccccgcaggaacagacaattttgcctattggcacaaaacttttgc
atgcgtggcctgtctaacttttattcagattcaaagaaaaggattcgtacatcctatcag
agccttactgaactctctgacaaccagcagtccattgacatggagagaagcaagtcgccc
acttcagatcatgtaaatggacattgcactagccccacctcccagccctgctcggcgggg
aagcctcgcatcccgatgggtccggaggggccacggcttacccgcagaggccctggccga
ccgcccttccgcaaggcccagtccgctgcttgcatggagatctctttgcctgtgtcccac
actgaagagagtcgtgaaaactccttcagccgctcacgcagctccagtgtgtccagcatt
gaccgggacaccaaagaggcaatcaccactctgcagttcggagagtcatatgggcgaaag
agtgacgccctgcccacaccatgtctgtgggtaggaaccagtttaggcgtggtcttactc
atcccaatgtccgttcccactgagcaggaggaaaggatggaggaatctgtcaccattggc
cccagtggaatggtcttgatgctgaaaggctctgtgttgcgctttggcttcttggactgc
atgggagcacacattcaaagcccctacgaagtttggcgagacctcaatgcccctgaggac
cctgatcgaccaaggaggcgcaagctggtaaatttttcaccctcgtcctcccaggacgcc
tgcggagagggacatctggctgtagtgtgctccgagaggcaggccaaagtattcttgatg
ccctcgcagtcttgcctctttgtccacaacatcactgagtcatcttttgtactgcgagcc
gacattgtatctgtgtctaacagcgtgtgcctggcctgcttctgcgctaacggacatgtc
atgacactcagtttgcccagtctaagaccgatgatggatgtcaattacctgcctatgaca
gacatgcgcattgcaagaaccttttgcttcaccaacggggggcaagcgctgtatctcagc
tccccgacagagatccagagagttacatacagccaggagatgtgtgacaacctgcaggaa
atgctgggagagctatttacaccaacagaaacaccagaagcccagaacagaggcttttta
aaaggcttctttggaggaaatgcccaaacattcgacagagaggagctctttggtgaggca
gcagctgggaaggcttctcggagtctggcacagcacatccccgggcaggtgggaatggag
ggcatgaaggtggcagctaccggagtggtgggtgaactggctcgggcccgtattgctctg
gatgaacgaggccagagactgggagagctggaagaccgaaccgccctgatgatgaccagt
gcagaaaccttctccaaacatgcccatgagctgatgctaaagtgcaaggacaagaaatgg
taccagttctaa
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integrated database retrieval system
