Scomber japonicus (chub mackerel): 128367847
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Entry
128367847 CDS
T09718
Symbol
u2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128367847 (u2af1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128367847 (u2af1)
Spliceosome [BR:
sjo03041
]
Complex A
U2 snRNP components
U2 related factors
128367847 (u2af1)
Complex B
128367847 (u2af1)
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Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
zf_CCCH_4
Torus
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
128367847
NCBI-ProteinID:
XP_053184485
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Position
11:complement(20524916..20531432)
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AA seq
232 aa
AA seq
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MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQ
SADGLTCAISDMEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRYE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKSRHRSRSRSRERRSRSRDRGRGGGRDHERRRSRDRERSGRF
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtacctggcgtccatttttgggacagaaaaagataaagtgaactgctctttt
tatttcaaaattggtgcctgccgacatggagaccgctgctccagattacacaataagccg
acattcagccagacaattgccctcctgaacatttaccgcaaccctcaaaacagtgcccag
tctgccgacggtctgacatgtgccatcagtgacatggagatgcaagagcactatgacgag
ttttttgaggaggtcttcacagagatggaagaaaagtacggagaggtggaggaaatgaac
gtgtgtgacaaccttggggaccacctagtgggaaatgtgtatgtgaagttccgttatgaa
gaggacgctgagaaggccgtgatagacctgaataatcggtggtttaatgggcagcccatc
catgctgaactgtctcctgtcacagacttcagagaagcctgctgtcgccagtatgaaatg
ggggaatgtactcgtggtggcttctgtaacttcatgcatctgaagcccatctcgcgtgaa
ctgaggagagagctctatggccgccggaggaagagccgtcataggtctcggtcacgatcg
agagagagacgatcacgttcaagggacagaggtcgaggaggtggccgtgatcacgagaga
cgtcgctccagagacagagagcgttcaggacgattctga
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