KEGG   Scomber japonicus (chub mackerel): 128367879
Entry
128367879         CDS       T09718                                 
Symbol
ccnt2a
Name
(RefSeq) cyclin-T2a isoform X1
  KO
K15188  cyclin T
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    128367879 (ccnt2a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sjo03021]
    128367879 (ccnt2a)
Transcription machinery [BR:sjo03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     128367879 (ccnt2a)
    Brd4/P-TEFb complex
     128367879 (ccnt2a)
    7SK RNP complex
     128367879 (ccnt2a)
SSDB
Motif
Pfam: CycT2-like_C Cyclin_N
Other DBs
NCBI-GeneID: 128367879
NCBI-ProteinID: XP_053184527
LinkDB
Position
11:complement(9229986..9242046)
AA seq 733 aa
MAACRGSSSKWFFTREQLENTPSRRFGVEPDRELSYRQQAANLVQDMGQRLNVSQLTINT
AIVYMHRFYMHHSFTKFHRNTISPTTLFLAAKVEEQPRKLEHVIKVAHACLNPQESPLDT
KSNAYLQQAQELVILESIVLQTLGFEITIDHPHTDVVKCSQLVRASKDLAQTSYFMATNS
LHLTTFCLQYKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYVDSSVTLELLDELTHEF
LQILEKTPSRLKRIRNWRATQAAKKPKSDGNQLADNSFAGPSMLQDHSLSDASLLGVPSS
NPSFSKAAATFNVPMPGQSGGAPLSLEVMAGTYNPASHSEWPQSNQAGYSSTCIKQEPLS
IPHQEQTMSLQTSASSLLQHPSVYRTEKTVEFNPVKQEQKGAGGSGVGKHQPPPQPAYPP
PPASQPPLPQPPSAQKLSLDKYREKHAAELAVSGQKRRQEQHGIMESDVRVDLSSSSSST
YAPSTMSQVDHRKHSQPYQVSLHVHGGTTNSPMKSKAPSSSSGQDRRHHSDKRDKGSLKV
RLAVPGSGGSSQLDKSGPPGKDELKMKIKVSSSERHSSSDEGMAANNKNKHSSPLVSKEK
QHRGADHNLHRHHKHSHPHTHTHSGNGRGGPEGPGGGGGLLRAPTGLVGMDVTALAHPGS
TSLSSSSSRKRAYAEGSHNHHPPSSSSTSSSKLSKISKGGTGAAGTSSFSSPLFSSSSSP
VLQCVSSGLQLCG
NT seq 2202 nt   +upstreamnt  +downstreamnt
atggcggcgtgccggggatcctcgtccaagtggttcttcacccgggagcaactagaaaac
acaccgtcccgccgattcggagtggaaccggaccgggagctgtcctaccgacaacaagcg
gcgaatctggtccaagacatgggtcagagactcaacgtctcccaactaacaataaataca
gctattgtttacatgcatagattttatatgcaccactctttcaccaaattccacaggaat
acaatatctccgaccaccttattcttggccgcaaaagtggaagagcaacctcggaaactc
gaacatgtgatcaaagttgcacatgcctgcctgaatccccaagaatcgcctctagacaca
aaaagtaatgcatacctccagcaagctcaagagctggtgatacttgaatccatagtgctg
cagaccctgggctttgaaattactattgatcacccacacactgatgtggtgaaatgttcc
cagctagtgcgagcaagcaaggatctggcacagacttcctatttcatggctaccaacagt
ctacacctcactaccttctgcctccagtacaagcccacggtgattgcctgcgtgtgcatc
cacctggcgtgcaagtggtccaactgggagatcccagtttccactgatggcaagcactgg
tgggagtacgtggacagctctgtcaccctcgagctgcttgatgagttgacccacgagttt
cttcagattctggagaagacgcccagccggttaaaaagaatacgcaactggagggcaaca
caagctgccaaaaagcctaagtctgacggcaaccagttggcggacaattcctttgctggt
ccttccatgctccaagaccattcccttagtgacgcctcgctcctcggagtcccatcctca
aacccaagtttttccaaagcagctgccaccttcaatgtcccaatgcctggccagtctgga
ggggcacctctgtctctggaggtcatggctggcacgtacaatccagccagccatagcgag
tggccccagagcaaccaagcagggtactcttccacctgtataaaacaagaacccctcagc
atccctcaccaagaacagacaatgtccttgcagacctccgcttcatctttgcttcagcat
ccgtcagtgtacaggactgagaaaacagtagagttcaaccccgtcaaacaggaacaaaaa
ggagctggtgggagcggagtaggcaagcatcagccaccacctcagcctgcctaccctcct
ccaccagcttcacagcctcctctgccacaacctccctcagctcagaaactgtctctggac
aaatacagagagaaacatgctgcagagctggctgtgtctgggcagaaacgcaggcaggag
cagcatggaataatggagagcgacgtgagggtggatctatcgtcttcctcctcttctacc
tatgcaccatccactatgagccaagtagaccacagaaaacattcacagccctaccaagta
tccctgcatgtccacggtggcaccactaactccccaatgaaaagtaaagctccttcctca
tcttcagggcaagatagacgccaccacagcgacaaacgggacaaaggctcacttaaagtc
cgcttggctgttcctgggtctggcggaagctcccagctagataaaagtggaccaccaggc
aaagatgagcttaagatgaagataaaagtttcatcatctgagcgccacagctcatcagat
gaaggcatggcagcaaacaacaagaataaacattccagcccgctggtgagcaaagagaaa
caacatcgtggagccgatcacaatctccaccgccatcacaagcacagtcaccctcacacc
cacacgcacagcggaaacggacgaggaggaccagagggaccaggtggcgggggaggcctg
ctacgggctcctacgggactggtcggcatggacgtgacggcgctcgctcatcccggatcc
acctctttgtcttcatcctcatcgcgcaagagggcgtacgccgagggcagccacaaccac
caccctccctcctcatcctccacttctagctccaaactgagcaaaatctccaagggtggc
actggtgctgcaggtacctcatctttttcttccccccttttttcctcctcctcctctcct
gtactgcagtgtgtctcatctggcttgcagctctgtggctaa

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