KEGG   Scomber japonicus (chub mackerel): 128367882
Entry
128367882         CDS       T09718                                 
Symbol
nup62l
Name
(RefSeq) nucleoporin 62 like
  KO
K14306  nuclear pore complex protein Nup62
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    128367882 (nup62l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sjo03019]
    128367882 (nup62l)
Messenger RNA biogenesis [BR:sjo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     128367882 (nup62l)
SSDB
Motif
Pfam: Nsp1_C DUF4164
Other DBs
NCBI-GeneID: 128367882
NCBI-ProteinID: XP_053184531
LinkDB
Position
11:16036369..16038809
AA seq 587 aa
MSGGFNFGQAPSGFTFGAQKTTAAAPAPGFNLTGSTPAPSGGGFTFGTAIAANTNPTGGF
SFGTPAKSTAAGGGLSFGTPATTFGLGSAPQTTAAAPAALTLGSTAAPAAGSGFTLGQSL
AGPTTGAAPAGGGFSFGNATQAQMQPPAAAAVPAATAAAAAAAAAAAATTAAAAASSGFS
FGAFSFGSAKVQPTSAAATAAPTGGGFSFGNTAPSNLTLGIQPQPQAQAQAQAAPTAAAA
TGQGGGFTFGIKPSLTPAPPASTQAAPPSGPSLFAAPISAAPAAPAAATAPATGFTLGAA
ATSTATPVAAAAAAAAAAAAAATSTAATGGLAFMLKPLGAATTIATSIPASTAAATTGAA
TSFSLGLKPASGTTTTTLSAASTITTTTAPPVMTYAQLEGLINKWSLELEDQERHFLQQA
TQVNAWDRMLVENGEKITALHKEMEKVKLDQRRLNQELDFILSQQKELEDLLCPLEESVK
EQSGTIYMQNADEERERTYKLAENVDAQLKRMSQDLKEIIEHLNTSSGPADTSDPLQQIC
KILNAHMDSLQWVDQNSVLLQRRVEEVSKLCDNQRKEQEKTFRLTFD
NT seq 1764 nt   +upstreamnt  +downstreamnt
atgagtggcggatttaactttgggcaagccccctcgggctttaccttcggagctcaaaag
accaccgccgcagctcctgcacccggctttaatctgacgggctccacacctgcaccctcc
ggagggggcttcactttcgggacagcgatcgcggccaataccaatcctaccggcggattt
agctttggcaccccagcaaagagcactgcagccggtggaggcctgtcctttggaaccccc
gccaccacatttgggctaggttcagctcctcaaaccaccgcagcagcaccagcagcgctg
acattaggctccacagcagcaccagcggcagggtcagggttcaccctgggccagagtttg
gcagggccaaccaccggggccgctcctgcaggagggggcttcagctttggcaatgccact
caagctcagatgcaaccaccagcagcagcagcagtcccagcagcgacagcagcagcagct
gctgctgcagcagcagcggcagcaacaacagcagcagcagcagcttcatcaggtttctca
tttggagcgttcagttttggatccgccaaggtccagccgacttcagctgcagccactgct
gctcccacaggtggaggtttctcctttggcaacacagcaccctccaacctcaccctgggt
atccagccccagccccaggcccaagcccaggcccaggcagctcccaccgctgcagctgca
acaggacagggtggaggatttacttttgggattaagccctcattaaccccagcgccccct
gcatcaacccaggcagccccaccttcaggtccctcactctttgctgctcctatctctgca
gctcctgctgctcctgctgctgccacagcaccagccacaggctttacattgggtgctgct
gcaacttcaacagcaaccccagttgcagctgcagctgccgctgctgctgccgctgctgct
gctgcaacaagcacagcagccactggaggtctggcttttatgctcaaacctctgggggca
gccaccaccattgccacatctattccagcctcaacggcagctgccacaacaggcgctgct
accagcttttcattggggctcaaacctgcatccggcacaactaccacaacactttctgca
gcctcgacgatcactacaaccactgctcctccagtaatgacctatgcccagctagagggt
ctcattaacaagtggagtcttgagcttgaggatcaagagagacatttcctacagcaagcg
actcaggtgaacgcctgggaccgtatgctggtggagaatggagagaagataacagcgctg
cataaagagatggagaaggtgaagctggaccagaggaggttaaaccaggagctggatttc
atcctgtcccaacagaaagaactggaggacttgctctgcccacttgaggagtctgtgaag
gagcagagtggaaccatctacatgcagaacgccgatgaggagcgtgaaagaacgtacaag
ctcgctgagaatgtggacgcccagcttaagaggatgtcacaggacctgaaggagatcatt
gagcacctgaacacatccagcggtccagcagacaccagtgacccacttcagcagatctgc
aaaatcctcaatgcccacatggattcacttcagtgggttgatcagaattcagtccttctg
cagagacgagtggaggaagtgtccaaactgtgtgataaccagcgcaaggagcaggagaaa
acctttcgtttaacatttgactaa

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