Scomber japonicus (chub mackerel): 128367984
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Entry
128367984 CDS
T09718
Symbol
ttf2
Name
(RefSeq) transcription termination factor 2
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sjo03021
]
128367984 (ttf2)
Transcription machinery [BR:
sjo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
128367984 (ttf2)
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Zn_ribbon_GRF
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
128367984
NCBI-ProteinID:
XP_053184672
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Position
11:complement(27360654..27373867)
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AA seq
1151 aa
AA seq
DB search
MEKVLCEVHGNVCMLKTGVKDGPNKGKSFYVCVDKQGCDFSHPASITPSHCLHHEDSVVE
LQALTFNQQQQNHKLFYRCMMGKKAGQRWCGNVPWTPPAKEKKNPLSDTQIQPSCLPPVR
NPFKAPGKTDEESEWRRMQCGGGDVKRKEAKDTEASGKGERRESNQKENMKSVSAGAKEK
EEEEEEGKLSGSDKYRGKQLPPGMKVKKRVSDEERKATSEDDAVDRIKESHNKQRDAEKT
SLTSSVKAAHAEKINLTSQESTQKPSTSEPCQDEKTDPTLKDSVSKSAPSSTTNTRHSAS
NKPTQPGSSQTKNHQDNKKKEDNDDVVLVSVKPAIQKTPPITTVQKTLTTFPGFQPASEG
KGLVPNPKGMHSLLTAQLQQKKATLSAVNLAALPDKGERLRTQVKELEDALESLSLTAAS
QPESQEDTGHNGSNARPGSSQVNPFSRQGGTILLPAPPAPVHYSQQASSSSLGLQLSQGC
TQTYGANPQGNTFYGGRMTNDRMLAVKNATSEVIDHLHKSLETCPGPEAEIPDPKGIKVT
LLAHQRRALAWLLWRETQTPCGGILADDMGLGKTLTMISLMLAKKIQAKKEEKEEEKKDE
KKEEKEAKGWLSKTDSSAVASKGTLIICPASLIHHWKMEVERHVKTGRLSVYLYHGTNRE
RSAKVLADYDVVVTTYSLVSKEIPVLKEEAERPSQDTDKVPSRSAPLLRVSWARVILDEA
HNIKNPKVQTSMAVCQLRARARWAVTGTPIQNNLLDMYSLLKFLRCAPFDEYKLWKAQVD
NGSNRGRERLNILTRSLLLRRTKDQKDSTGKPLVSLPDRTCEVHQLKLSKDEQAVYDVVF
AQSRSTLQNYLKRHEEKDMDHRKPSTSNPFEKVASEFGMSQSDPAVSSSQQPQQASSTVH
ILSLLLRLRQCCCHLSLLKKTLDSTELQGDGIVLSLEEQLNALSLSSSPSTSGTHPKDTV
ALNGTQFSSHLFENSSESTKISAIVSELRAIRQKSDDQKSVIVSQWTSMLQIVAVHLKQM
GLTYAVIDGTVNPKRRMELVEEFNTNPKGPQVMLVSLCAGGVGLNLIGGNHLFLIDMHWN
PALEDQACDRIYRVGQSKDVTIHRFVCEGTVEDKISTLQAKKKELAQNVLSGTGSTFSKL
SLADLRIIFGV
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggttttatgtgaagtacacggaaacgtgtgcatgttaaaaacgggagttaaa
gatggaccaaataaaggcaaaagcttctacgtctgcgttgacaagcaaggctgtgatttc
agtcatccagccagcatcaccccctcccactgcctccatcatgaagattcagtggtggaa
ctccaagctctcaccttcaatcaacagcaacagaaccacaagttgttctaccggtgtatg
atgggtaaaaaagccggccagagatggtgtggaaacgttccctggactccaccagcaaaa
gaaaaaaaaaaccctctatctgacacacagatacagccctcctgtctgccgcctgtccga
aacccctttaaggccccgggtaaaacggacgaggagtcagagtggaggaggatgcagtgt
ggtggaggcgatgtgaaacgaaaggaggccaaagacactgaggcaagtggcaaaggcgaa
agaagagagagtaaccagaaagaaaatatgaagagtgtaagtgcaggagcgaaagaaaaa
gaagaagaggaggaggaagggaagttgagtggatcagacaaatacagaggcaaacagctt
ccaccggggatgaaagtaaagaagagagtttcggatgaagagagaaaagctaccagtgag
gatgatgcggtggataggattaaagagagccacaacaagcagagagatgctgaaaaaaca
agtcttacctctagtgttaaggctgctcatgctgagaaaatcaatctcacctcacaggag
tcgacccagaagccatctacctctgaaccctgtcaggatgagaaaactgaccctacgcta
aaagacagtgtttctaaatctgctcccagtagcactaccaataccagacactctgcatct
aacaaaccaacgcaaccagggtccagtcaaaccaaaaatcaccaagacaacaagaagaaa
gaggataatgatgatgtagtgctggtttcagtgaagcctgccattcagaaaactcctcct
attactaccgtccaaaagaccctcaccaccttcccaggtttccagccagcctctgagggc
aaaggtctggtgccaaatcccaaaggaatgcacagcctgctcactgcacagctccaacag
aaaaaggccactctgtctgcggtgaatttggcagctctgccagataaaggggaaaggttg
aggactcaggtcaaggagctggaggatgcgctggagtcactaagcctcactgctgcttct
caacctgagtcccaggaggatacaggacataacggcagcaatgctcgtccaggttccagc
caggtcaacccattcagtcggcaggggggcaccatcctgctccctgcaccccctgctcca
gtacactactcgcagcaggcctccagtagctccctggggctccagcttagccaaggatgc
acccagacgtatggagcaaacccgcagggcaacaccttctacggcggcaggatgaccaat
gaccgtatgctggcggtgaaaaatgccacgagcgaagtcatcgaccatctccacaaatcc
ctggagacctgccctggccccgaggcagagatcccagaccctaaaggcatcaaggtgacg
ctcctggcccatcagaggagagctctggcttggcttctctggagagagacccagacaccc
tgtggagggattttggcggacgacatgggtctaggaaagacgctgactatgatttctctc
atgttggccaagaagatccaggcgaaaaaggaagagaaggaagaagagaaaaaagacgag
aagaaggaagagaaggaggcgaagggctggctctctaaaactgattccagcgccgtggct
tctaaaggcactctgatcatctgtcccgcctctctgattcaccactggaagatggaggtg
gagagacatgtcaagacgggcaggctgtcggtgtatctgtaccacggcaccaaccgcgag
agaagtgccaaagtgctggcagattatgatgtggtggtgacaacatacagtctggtctct
aaggagatcccggtcctgaaggaggaggcagagagacccagccaggacacagataaggtg
ccgtcacgctcggctcctctcctgagagtgtcctgggcccgggtgattcttgacgaagcc
cacaacatcaagaacccaaaagtacagacctccatggcggtttgccagctgagggcccgt
gcacgctgggcagtgaccggcactcccatccagaacaacctgctggacatgtactcactg
ctcaagtttctgcgttgtgctccgtttgatgagtacaaactttggaaagcgcaggtggac
aacggctccaatagaggcagagagagactcaacatcctgacgaggagcctgctgctccga
cggaccaaagaccagaaggactccactggaaaaccactggtatctcttcctgatcggacc
tgcgaggtgcatcagctcaaactgtctaaggatgagcaggctgtgtatgatgtggtcttc
gcccaatccagatctactctgcagaactacctgaagagacatgaagaaaaagacatggac
catagaaagccttccacctctaacccctttgagaaagtagccagtgagttcggtatgtcc
cagtctgaccccgctgtgtccagttcccagcagccccagcaggcatccagcaccgttcac
atcctgtcactgctgctgcgcctccgacagtgctgctgtcacctatctctcctcaagaag
actctagactcgacggagctgcagggcgatgggattgttttatcactggaggagcagctc
aacgctctctcgctctcctccagcccctccacatcagggactcatcccaaagacactgtg
gcccttaacggcacgcagttctcctcgcatctgtttgagaacagcagcgagagcaccaag
atttctgctattgtttctgagctgagggcaatcagacagaagagcgatgatcaaaaaagt
gtgatcgtgtctcagtggaccagcatgctgcagatcgtggcggttcatctaaagcaaatg
ggcctgacatacgctgttatcgacgggacggtcaaccccaaacgccgcatggaactggtg
gaagagttcaacactaatcctaaaggaccacaggtgatgctggtctctctatgtgctgga
ggggttgggctcaatcttattggtgggaatcacctcttcctcattgatatgcactggaac
ccggcattggaggatcaagcatgtgaccgaatctacagagttggacagagtaaagatgtc
accatccacaggtttgtgtgtgaaggcacagtggaggacaaaatttccacactgcaggcg
aagaaaaaggagttggcccaaaacgtgctgtcaggaacaggaagcactttctccaaactc
tccctggctgatctcagaatcatttttggtgtttga
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integrated database retrieval system
