Scomber japonicus (chub mackerel): 128368005
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Entry
128368005 CDS
T09718
Symbol
pgap1
Name
(RefSeq) GPI inositol-deacylase
KO
K05294
GPI inositol-deacylase [EC:3.-.-.-]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
sjo01100
Metabolic pathways
Module
sjo_M00983
GPI-anchor remodeling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
128368005 (pgap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128368005 (pgap1)
Membrane trafficking [BR:
sjo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Post-GPI attachment to proteins factors (PGAP)
128368005 (pgap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PGAP1
PGAP1_3rd
PGAP1_TMD
Abhydrolase_6
Abhydrolase_1
PGAP1_2nd
Palm_thioest
Hydrolase_4
DUF676
Lipase_3
Esterase
Motif
Other DBs
NCBI-GeneID:
128368005
NCBI-ProteinID:
XP_053184694
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All DBs
Position
11:5681411..5705138
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AA seq
938 aa
AA seq
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MKLATVIFYGLSLGLLAVGLRELLTGFEENRCSMTYMFEYPEYRRVALPRRVARLYPAYG
LYLYGEGLYAQETRSLKLTGAPVLFLPGNAGSYKQARSLGSVALRKAENMEGGLHFNVFT
VDFNEELVALYGGSLLRQTHFLHESIKAILKLYKHLKAPPQSVVLVGHSMGGVVARALYT
LPRFNTNLVSLIITQASPHLAPVLALDPYLLDFYSAVRQKWVSQAKKLRNVTVLSVGGGY
RDYQVRSGLTSLPCPPEDPNKLSLVATAVPRTWVSTDHLSIVWCKELVLASVRAFFDLID
PETRQFTDDPEKKMTVLNHHFIRHPVRMLEETQDTSISILDFPEAWSEVNTLRLAYTTPK
EGQVKYFVFALSSRRKAYSHFYCRSNNMEMSSWVYGCVQRNGSSCVRAVDLSMETELLPP
YKVLILSLSDLSSVTHLVVSASNLNGKQFTVECEWQREESQTLSLPVPHVLSFGLTASDI
TVNSSGLLHTIVLQHFHQVYQAFRITVASQCKVNKDRLSNVYRIKVPWFREDSLTTASVP
SVTEISGMLHTSRPDNTSGVLLQLHTAPNCQYKVSVRTSLPRVLGQILRFCGPMVPVYTA
VTLLLACGGQLSSIRKSGRAAAMGQVVGKGLQPHKVNLLVFTLHISLSCSWFKEVWSFLY
LPPVDALPPTFPDATFHEGEVPVEEWPRLMSPLLYLFGAAVAYWGSAILRLIIRLVSLVL
ATLHRPSVSRDCGTLQLRTQVLITLSLAVFGGVSCGAMSLSVAFMLHLYRVLRLQMTERS
LSHMLNLAPRKHKETENGKVDVETSVKSRECNGAPLLSECALQEVRDDLQLHLCLSAVLT
LPVMLSAPSLIHWIRNLRYSTQLDPDPCWPHIVPLIIVYMLLINCNTLKLSNSKLLPLTS
CLPLPLSIAMVMFSPLHLYRVTYFLLATLVPLALCCLL
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgccactgtgatattttacgggttatctctggggctgctggctgtcggcctg
cgagagttgctgactggcttcgaggagaacagatgcagtatgacctatatgtttgaatac
ccggagtaccgccgggtcgccttgcctcgccgcgtggccagactgtacccagcgtacggg
ctctacctgtacggagagggtctgtacgcccaggaaacccgttcccttaaactcaccggt
gcccctgtgctcttcctgcctggaaatgcaggcagctataaacaagctcgctcgctgggc
tctgtggccttacggaaggctgaaaacatggagggaggtctccacttcaacgtgttcacg
gtggatttcaacgaggagctggtggctctttacggaggcagcttgctccgacagacgcac
ttcctgcacgagagcatcaaagccatcctgaagctgtacaagcacttgaaggccccccct
cagagtgtggtgctggtgggtcactccatgggaggagtggtggctcgggcgctgtacacg
ttaccccgcttcaacacaaacctggtcagcctcatcatcacgcaggcctcccctcacctg
gctcccgtgctggccctggacccctacctgctggatttctactctgctgtgcgacagaag
tgggtgagccaggcgaaaaagctcaggaatgttacagtcctgtcagtcggtggtggttac
cgtgactaccaggtccgctccggtctgacatccctaccttgtcccccagaagaccccaat
aagttgtcactggtggcaactgcggttccaaggacatgggtgtccaccgaccatctgtcc
atcgtttggtgcaaagagcttgttctcgcttctgtccgagctttcttcgacctcattgat
cctgaaacgagacagttcacagacgacccagagaagaaaatgactgttctgaaccatcac
ttcatcagacaccctgtcaggatgctggaagaaactcaagacacttccatctccatccta
gattttcctgaagcgtggagtgaagtaaacacactgcgtctggcttatacaacaccgaag
gaaggacaagtcaaatactttgtgtttgcactgtcgagtcggaggaaagcttacagtcat
ttctactgcaggagcaacaacatggagatgagcagctgggtgtacggctgcgtgcagagg
aacggctcttcatgtgtgcgagcagtggatctgtccatggagacggagcttctgcctcca
tacaaggtcctgattctgagtctcagtgatttgtcttcagttactcatctggttgtttcg
gcctccaaccttaacggcaaacagttcacagtagagtgcgagtggcagagagaagaatca
caaactctgtctctcccagtaccgcatgtcctctccttcggtttgaccgccagcgatatc
acagtcaactcctccggtcttcttcacaccatcgtgctgcagcattttcaccaggtctat
caggctttcagaatcactgttgccagccagtgtaaagtgaataaagatagattatccaac
gtgtacaggataaaggtcccgtggtttcgggaggactctttaaccacagcgagtgtgcca
tcagtgaccgagatctcagggatgctccacacaagtcgtccagacaacacctcaggcgtc
ctcctccagctccacactgcccccaactgccagtataaggtgtcagtcaggacttcatta
cccagggtgcttggacagatactgaggttctgtggtcccatggtgccggtgtacacagct
gtaactctcctcctggcctgcggggggcagctgtcctccatcaggaagtctggcagagct
gcagccatgggccaggtggttggaaaaggcctgcagcctcataaagtcaacctgcttgtt
ttcaccctgcacatttcactcagttgtagctggtttaaagaggtctggtcatttctttac
ctccctcctgtggatgctctccctccaactttccccgatgcaacgtttcatgagggtgaa
gtccccgtcgaagagtggcctcgcctcatgtcccctctcctctacctcttcggggcagcc
gtggcatattggggcagcgcaatcctccgtctcatcatacgcctcgtttcattagtatta
gctacactacacagaccttcagtctctagagactgcggcaccttgcagctgcggacccag
gtcctcatcactctgtctctggctgtttttggcggagtgtcctgcggggcgatgtcgctg
tctgtggcctttatgcttcacctgtacagggtactcagactacagatgacagaaagatct
ttgagtcacatgctgaatctggctccacggaagcacaaagaaaccgagaacggcaaagtc
gacgtcgagacatcagtcaagtccagggaatgtaatggcgcccccttgctgtctgagtgc
gctctgcaggaggtgagggatgatctgcagctccacctctgcttgtcagctgtcctcaca
ctgcccgtcatgctcagcgcaccttcacttatccactggatccgcaacctgaggtactcc
acccagttggatcctgatccttgttggccgcacattgtgcctctaatcattgtctacatg
ctgcttattaactgtaacactttaaaactcagcaacagtaaacttctgcctttgacgtcc
tgcctccctctgcccctgtccatcgccatggtgatgttctctcccctccacctctacaga
gtcacctacttcctgttggcgacgctcgtccctctggctttgtgttgtctgctctga
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