Scomber japonicus (chub mackerel): 128368050
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Entry
128368050 CDS
T09718
Name
(RefSeq) VPS10 domain-containing receptor SorCS1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128368050
Membrane trafficking [BR:
sjo04131
]
Protein recycling
Others
Others
128368050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
PSII_BNR
Motif
Other DBs
NCBI-GeneID:
128368050
NCBI-ProteinID:
XP_053184758
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Position
2:complement(36283841..36456342)
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AA seq
1244 aa
AA seq
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MEREVIFCQKWHSALWFSLLMMVCLFQADKAEITCRSCQDGNKWRAQELLLNFNTHESAT
GLNGEVFGHEDGAGRGEAAGAESRRRLRCAAGSAECAPDRGEYTEQRLKRNTEGEFAKMK
VSHVKMSVSGQGKTGDGDGDGAGPDSASHYRKRARRNSDVRSSGSTQSQHPGEGISSAAG
RRVTRSELRWSREERRAGGKQEELKLNSTTFALTGDSSHNQAMVHWSGQNSSVILMLTKL
FDFNLNSVTESSLWRSTDYGATYQKLNDKVGVKTILSYLYVSPNNKRKIMLLTDPEVESS
LLISSDEGATYQKYRLNFYILSLLFHPEQEDWILAYSHDQKLYSSVEFGRRWQLVHERVA
PNRFYWSKMGLDKEPGLIHLETSISEGQALYVTCKLQNCTDANKGKPFPGYIDPNSLVVQ
DEYVFVQVSTAGRPIYYVSATRDVFTPMKLPKYTLPKDLHVISTDENRVVAAVQEWNQNE
TYNLYVSDTSGVYYTLALENVVSSMGPEGNVMVDLYEVAGIKGMFLANKKTDNQVKTHIT
YNRGRDWRLLQAPNKDLRGNNIHCVLPYCSLHLHLHVSANPYTSGNIASRDSAPGIIVAS
GSIGSELTTSNVSVYITSDAGNAWRQIFDEEYAVLYLDQGGALVAIRHTPLPIRHLWLSF
DEGRQWSKYSFTSTPLFVDGVLGEPGEETLIMTIFGHVSHRSEWQLVKIDYRSIFNRRCM
EADYQTWHLHNQGEPCLMGVKRIYRKLKPMSRCVMGKTYSVSMTSGPCDCTEADFECDYG
YERRTDGKCNPAFWFHPSAMSRSCTTGMTFLNSTGYRKVVSNNCTAGVSMEYTARRQQCP
IQAPKGLHLVTSEGTLTATLGTNVTFLVFLEEGDGAKTSITLDFGDGHALTYSNVSSIED
GIKHIYKAVGIYRVTATGENNLGSETAVLYLHVACQLEYIHLSAPFVAVRNKEVNLTAVL
WPSQVGTVTYIWWIGNNTEPVITLEGSVACTFSREGINTVTLQVSAGNTILQDRKDIAVH
EYFRSHLLAFSSNLDDHNPDVPEWRQDVSRVIRNSLIQATGVREDQLLVTVLPGLPTTAE
FFLLPDKLLTEGKPEKSSAHLDQLSEVLLIALNQNLVQFTLRPGVQVTVYAAHLSAAPLV
DTSENHSGSAMLMLLSVVVVGLAVFVIYKFKRKIPGLNVYAQMQNEKEQEMMSPANPTEA
APSSQRDLVPSLEILDTEFNSRPIGCMKPHVHVKFSTELPTYIV
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggagagggaggtcatattttgccaaaagtggcacagtgcgctttggttttctcttttg
atgatggtgtgtttatttcaagcagataaagctgagataacctgcaggtcatgtcaggat
ggaaataagtggcgtgcgcaggaattactgttgaattttaacacgcatgaatccgcaaca
ggattaaatggagaagtttttggacatgaggacggggcagggagaggcgaggctgcaggt
gccgaaagtcggcggcggctccgttgcgcagctggatccgctgaatgcgctccagatcgg
ggggaatacacagagcagaggctgaaacggaatactgaaggcgagtttgccaagatgaaa
gtttctcatgttaaaatgagtgtgagtggtcagggcaagaccggtgatggagatggtgat
ggcgcaggtcctgactctgcaagccactatagaaagcgcgccagaaggaacagcgatgtc
agatccagcggttcaactcagagtcaacacccgggagagggcatcagctcggcggctgga
cgcagagtgacacgctccgagctgcgctggagcagagaggagaggagagccggtggcaag
caggaggagctcaaacttaacagtaccacattcgccttgaccggagattcatctcacaac
caggctatggtgcactggtccggccaaaacagcagcgtgattctgatgctgaccaaacta
ttcgacttcaacctcaacagtgtgactgagagttcattatggaggtcaaccgactacgga
gcaacataccagaagctgaatgacaaagtaggagtgaagacaatactcagttatttatac
gtgagccccaacaacaagaggaagatcatgctgctgactgatccagaagtggagagcagt
cttctgatcagctctgacgaaggagccacctaccagaagtaccggctgaacttctacatc
ctcagcctgctcttccaccccgagcaggaggactggattctggcctacagccacgaccaa
aagctctacagctcggtggagtttgggaggaggtggcaactggtgcacgagagagtggct
cccaatcgtttctactggtcgaaaatgggtttggacaaagagcccggcttaattcacctg
gaaaccagcatctctgaaggacaggcgctgtatgtcacctgcaagctgcagaactgcaca
gatgccaacaagggcaaaccattccccggctacattgaccccaattctctggtggtgcaa
gatgagtatgtgtttgtccaggtgtcaactgcagggaggccaatctactatgtgtctgct
acaagagatgtctttacaccaatgaaactgcccaagtacactttgcccaaggacttgcat
gtgatcagcacggatgaaaatcgcgtcgtggcagccgtacaggagtggaaccagaatgaa
acctataacctgtacgtgtccgacacatcaggggtctactacactctggctctggagaat
gtcgtcagcagcatgggccctgaaggcaacgtgatggtagacctatatgaggtagcagga
ataaaagggatgttcctcgccaacaaaaagacagataaccaagtgaagacgcacatcacc
tacaacagaggcagagactggaggttactgcaggccccgaacaaagacctaagaggaaac
aacatccactgcgtgctgccgtactgttcattacatctccatcttcacgtgtctgcaaat
ccctacacatctggaaacatcgccagcagggactcggctccagggatcatcgtcgcatca
ggctccatcggctctgagctgaccaccagcaatgtcagtgtgtatatcacctcggatgcg
ggaaacgcatggagacagatctttgatgaggagtatgcggtgctgtatctcgaccaagga
ggggccttagtcgcaataagacacactccgcttcccatccgacacctgtggttgagcttt
gacgaaggacggcagtggagcaagtacagcttcaccagcacgcctctgtttgtggacgga
gtgctgggagagccaggggaagagactctcatcatgacaatatttggtcatgtcagtcat
cgctcagagtggcagctggtgaaaatagactacaggtccatcttcaacaggaggtgcatg
gaggcagattatcagacgtggcatctacacaaccagggtgagccgtgcctcatgggagtg
aaaagaatctaccggaagctgaagcccatgtccaggtgcgtgatggggaagacgtactcg
gtttccatgacgtcaggtccatgtgactgtacagaggctgactttgaatgcgattacggt
tacgagagacggaccgatggcaagtgcaaccccgccttttggttccatccatcagccatg
tccaggagttgcaccacggggatgacgttccttaacagcaccggatacaggaaggtggtc
tctaataactgtacagctggggtcagtatggagtatacagccaggaggcagcagtgtccc
atccaagcacctaaaggtctccacctggtcaccagtgagggcaccttaacggccacatta
ggcaccaatgtcaccttcctagttttcctggaagagggcgacggggcgaagacgagcatc
acgctggactttggtgacggccacgcgttgacgtattccaacgtgagctccattgaggac
gggattaaacatatctacaaagctgtgggaatctaccgggtgaccgccaccggggagaac
aacctcggctcagagaccgccgtgctctatctgcacgtagcatgtcagctggagtatatc
catctctcagctccctttgtggcggtgaggaataaggaagtgaatctgactgccgttctg
tggcccagccaagtgggaacggtcacctacatctggtggatcggaaataacacagagcca
gtaatcaccctagagggaagtgtggcatgcacgttctcccgggaaggcatcaatacagtc
actctgcaggtgtccgcagggaatactattctgcaggatagaaaagacattgctgtccat
gaatattttcgttctcatctgctcgctttttcatcaaacctggacgatcacaaccccgat
gttccagaatggagacaggacgtgagccgagtcatcagaaactctctgatccaggctact
ggcgtcagagaggatcagcttctggtcaccgtcctcccagggttaccaacaacagcagag
tttttccttctgcctgacaaactgttgacggaagggaaaccagaaaaaagctcagctcat
ttagatcagctctctgaggttttgctcatcgccttgaatcaaaaccttgtccagttcaca
ttgcggccaggggtccaagtcacagtctacgcagcacacctatcagcagcgccccttgtg
gacaccagtgagaaccacagtggctctgccatgctaatgctgctatcagtagtggttgtg
ggtttagctgtatttgtcatctacaaattcaagaggaagatcccaggcctcaacgtctat
gcgcagatgcagaacgaaaaagaacaagaaatgatgagtccagctaatccaacagaggcc
gcgcccagctcacagcgggacttggtgccttctttggagattctggacacagagttcaac
tcacggcccatcggatgtatgaaacctcatgtacatgtgaaattctccacagaactcccc
acatacatcgtctga
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