Scomber japonicus (chub mackerel): 128368108
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Entry
128368108 CDS
T09718
Symbol
lss
Name
(RefSeq) lanosterol synthase
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00100
Steroid biosynthesis
sjo01100
Metabolic pathways
Module
sjo_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
128368108 (lss)
Enzymes [BR:
sjo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
128368108 (lss)
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
E2F_TDP
EspB_PE
Motif
Other DBs
NCBI-GeneID:
128368108
NCBI-ProteinID:
XP_053184823
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Position
11:complement(6419170..6434137)
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AA seq
753 aa
AA seq
DB search
MNSFGSLEYLPLYLTTAAMTEGTHLRRRGGPYKTEPVTDLSRWRLTNVDGRQTWRYVEDG
ETPDREQTMLEAHSLGLDTTKFMSGSPAAHTAVDAALKGMNFYRNLQAEDGHWAGDYGGP
LFLLPGLLITCHVAKIPLGAAWKKEMVRYLRSVQLPDGGWGLHIEDKSTVFGTALSYTSL
RILGVEPDDPDMVRARNNLHSKGGAAGIPSWGKFWLAILNVYSWEGMNTLLPEMWLFPTW
MPAHPSTLWCHCRQVYLPMSYCYAVRLAAEEDSLVLSLRQELYVQDYATIDWPAQRNNVA
ACDIYTPHSTLLTVAYMVLNVYEAHHSSTLRGMAVKELYDHIQADDRFTKCISIGPISKT
INMLVRWYVDGPSSPVFQEHVSRIPDYLWLGLDGLKMQGTNGSQLWDTCFAVQAFLEAGA
QDNPRLAECLRDAHQFLAHTQIPDNPPEYQKYYRQMNKGGFPFSTRDCGWIVADCTAEGL
KSVMLLQELCSSINQPIRSDRLYDAVNVLLSMKNSDGGFATYETKRGGKLLELLNPSEVF
GDIMIDYTYVECTSAVMQALRHFQKAHPEHRAEEISSTLREGLEYCRKVQRPDGSWEGSW
GVCFTYGAWFGLEAFACMGHVYKDEDVCVEVQKACQFLLDWQMPDGGWGEDFESCEQRCY
IQSSEAQIHNTCWALLGLMAVRHPDQRAIERGVQLLIDKQLPNGDWPQENISGVFNKSCA
ISYTSYRNVFPIWTLGRFSTLYPFSPLTGKVKL
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgaattcattcggttcattggagtatttacctctgtatctgacaactgcggcgatgacg
gaggggacacacctgcggaggcgaggagggccgtacaagactgagcctgtcacagacctg
agccgctggaggctgaccaatgtggacggcaggcagacgtggcgttatgtggaagatgga
gaaactccagacagagaacaaaccatgttagaagcccattcgctgggtctggacacgact
aagttcatgtctggctcgccggccgcccacacagctgtggatgctgctctgaaaggtatg
aacttctacagaaacctccaagctgaggacggccactgggcaggagactacggcggccct
ctcttcctgctcccaggtctcctgattacgtgtcatgtggctaaaatccctctgggagcg
gcctggaagaaggaaatggtgagatacctgcgctcggttcagctgccggatggaggctgg
ggactacatattgaagataagtcgaccgtgtttggcacagcgctgagctacacctcgtta
aggatactcggagtggagcctgatgatccagatatggttcgagccagaaacaacctgcac
agcaaaggaggtgcagcagggattccttcgtggggtaaattctggttggccattttaaat
gtgtacagctgggaagggatgaacacactcctgccagagatgtggctgttccccacctgg
atgccggcccacccctccaccctgtggtgtcactgtcgccaggtttacctccccatgagt
tactgctacgctgtccgactggcagcagaggaggactcgctggtcctcagcctcagacag
gagctttatgtccaagactacgccaccatcgactggccggctcagaggaacaatgtagca
gcttgtgacatatacacacctcacagcaccctgctcaccgtcgcctatatggtgctgaac
gtgtatgaagcccaccacagcagcacgctgagagggatggccgtcaaagagctgtacgat
cacatccaagccgacgaccgcttcactaaatgtatcagcatcggaccgatctccaagacg
atcaacatgctggttcgttggtacgtggacggcccgtcctctccggtctttcaggagcac
gtttccaggatcccagactacctctggttgggattggatggcttgaaaatgcagggaacc
aacggatctcaactctgggatacttgctttgctgtgcaggctttcctcgaggcgggtgcc
caggataaccccagactcgctgagtgcctccgagacgcccatcagtttctcgcccacacg
cagattcctgataatcctcctgaataccaaaaatactacagacaaatgaacaagggaggt
ttccccttcagtacccgcgactgtggctggatcgtggccgactgcacggccgagggcctg
aagtcagtgatgcttctgcaggagctctgttcctccatcaaccagccgatccgctcagat
cgcctctacgatgccgtcaacgtgctgctgagcatgaaaaactcagacggaggatttgcc
acatatgaaacgaagagaggagggaaactgttggagctgctcaacccctctgaggtgttt
ggtgatattatgatagattatacttatgtggagtgtacatcagctgttatgcaagctctg
aggcatttccaaaaggcccatcctgaacaccgtgctgaggagataagctccactcttaga
gaaggactggagtactgcaggaaggtgcagaggcctgatggatcctgggaagggtcctgg
ggagtgtgcttcacatatggagcgtggttcggccttgaagcttttgcttgtatgggtcac
gtctacaaagatgaggatgtgtgtgtggaggtgcagaaagcctgtcagttcctgctggat
tggcagatgccagacggaggctggggggaggactttgagtcgtgtgagcagcgttgttac
atccagagcagcgaggctcagatccacaatacctgctgggctttgttaggcctcatggct
gtcagacatcctgaccagcgggccattgagagaggggtccagctgctgattgacaagcag
ctgcccaacggagactggccacaggagaatatttcaggtgtgttcaacaagagctgcgct
atcagctacacctcctacagaaacgtcttccccatctggaccctcggccgcttctcaaca
ctttaccccttcagtcccctaactgggaaggtcaagctgtga
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