Scomber japonicus (chub mackerel): 128368125
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Entry
128368125 CDS
T09718
Symbol
zeb2a
Name
(RefSeq) zinc finger E-box-binding homeobox 2a isoform X1
KO
K23560
zinc finger homeobox protein 2
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128368125 (zeb2a)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
128368125 (zeb2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
Homeodomain
zf-met
zf-C2H2_15
zf-C2H2_6
zf-C2H2_2
Csm1_N
Motif
Other DBs
NCBI-GeneID:
128368125
NCBI-ProteinID:
XP_053184849
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All DBs
Position
11:43715..108265
Genome browser
AA seq
1210 aa
AA seq
DB search
MKQDIMEGPRCKRRKQANPRRKNVLNYENVVETSSETDEDDRTLVSEENGLANGGGGRGA
GEEDEDAGSPASVPTLEASPRVAHALLSYGGPEESEVRESLHHGWRLQDDTSGHLNGTDD
RKDEYEADGPEASLHAVGNGTAKRLDGVSELDEYFLKRKLEDGDGHPATIAEYLQRSDTA
IIYPEAPEEVTRLGTPEAFGPDESEHDVPPGAADDFAALLTCPYCDRGYKRLTSLKEHIK
YRHEKNEESFACPLCADSFGHRAQLERHMTTHKPARDQPQLLNEGAGNRKFKCTECGKAF
KYKHHLKEHLRIHSGEKPYECSNCKKRFSHSGSYSSHISSKKCIGLIAVNGRVRNGNKPG
SSPNSTTSSPGSPALAQLRHKLENGRPLGPHDQQGQLDIKAEPIDFNEYRLLMASQFGGA
SVYMNNRGGSPLGLHGSSQSPLQHLGGLGIDLPLLGYGGHLGNNLSEVQKVLQIVDNTVC
RQKMDGNPEEISKLRAYMKELGAQMEEQKLALSAQQAGFQLVGHGSPTKSIIDYTLEKVN
EAKSLIDDSKRQVDIKQEKNHSVDLSEEKSHDGQNQNQFLPFSCQFCKESFTGPIPLHQH
ERYLCKMNEDIKAVLKPAETSPARRRGAMSSELPTNERSTSPINPFKDHVSVLKAYFAMN
TEPNSEELLKISIAVGLPQEFVKEWFAQWKSQNHHGGGLRKKSPTPDHGGSDGNHSLTRS
PLSHPAVDFINGDASHRLSINNQFTANRQTTGDKPLDPLDHLRNNTPSPLNLSSTSSKNS
QSSSYTPNSLASEDAHGDIPLDLSLPKHMAQRKRHRPNGFSIDRNGELQVQDQASRPLDL
VHIKKEILGADGGGNAMHQLEKSTSPIFGINPFTGSPVYTSLPTHGAFPPPTFMSPAQAT
IPGLRPYPGLDPMSFLPHMAYTYATGAATFAEMQQRRKYQRKPGFQGELLDGTADYLSGL
DDLADSDSLLSRKKIKKTESGMYACDLCDKTFQKTSSLLRHKYEHTGKRPHQCQICKKAF
KHKHHLIEHSRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKREAEEREAAEREAR
DKGGGGGSSVAAGGGMEPTELLMRRAYLQGLGPLGYSDPEDQQEDAGGTILRDGSEGRVS
EREVDKSYEDVTDRQEASFREGEEEEEEGGGDSRSQMDSTRDDGEGKDTTQLMDESLREG
KTDGKSDQED
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaagacatcatggagggtccccgctgcaagaggcgaaaacaggccaacccccgg
aggaagaacgtgttgaactatgagaacgtggtggagacgagttcggagacggacgaagac
gacaggacgttggtgtctgaggagaacggcctcgctaatggcggaggaggaagaggagca
ggagaggaggatgaagatgcgggcagcccggccagcgtgcccactctggaggcgtcgccg
cgggtcgcccacgctctgctatcctacggcggcccggaggagtcagaggtcagggagagt
ctacaccacggctggaggctgcaagacgacaccagcggacacctgaacggcaccgatgac
aggaaggacgagtatgaagccgacggtccggaggcgtctctgcacgcggtgggaaacgga
acagcgaagcgtctggacggcgtctccgagctcgacgagtacttcctgaagcgtaaactg
gaggacggcgacggtcacccggcaaccatcgccgagtacctgcagcgcagcgacaccgcc
atcatctaccccgaagccccggaggaggtgacgcggctgggaacgcccgaagccttcggt
ccggacgagagcgagcatgacgtgccgccgggcgccgccgatgactttgcggcgctgctc
acgtgtccgtactgcgaccgcggatacaagcggctcacgtctctgaaggagcacattaaa
tatcgccacgagaagaacgaggagagcttcgcctgcccgctgtgcgccgacagcttcggc
caccgcgctcagctggagcgtcacatgaccacgcacaagccggccagagatcagccgcag
ctgctgaacgaaggagctggaaaccgcaagttcaaatgcaccgagtgtggaaaagccttc
aaatacaaacatcacctgaaggagcatctgcgcattcacagcggcgagaagccgtacgag
tgctccaactgtaagaagcgcttctcccactccggctcctacagctctcacatcagcagc
aagaaatgcatcggactgatcgccgtcaacggacgagtacgcaacggaaacaagcccggc
tcctccccgaactctacgacctcatcgcctggaagccccgccctcgcacagctgcgccac
aaactggaaaacgggcggccgctcggcccgcatgaccagcagggtcagctggacatcaaa
gccgagcccatagacttcaacgagtaccggctgctgatggcctctcagtttgggggagcg
agcgtctacatgaacaatcgtggcggaagcccgctgggcctccatggctcctctcagagc
ccccttcaacatctgggcgggctggggatagacctgcccctgctgggctacggagggcat
cttgggaacaacctgagcgaggtgcagaaggtgcttcagattgtggacaacactgtgtgc
aggcagaagatggacgggaacccagaggagatctccaagctcagggcctacatgaaggag
ctgggggcccagatggaggagcagaagctggcgctgtccgctcagcaggccggcttccag
ctggtgggccacggcagccccactaagagtatcatcgactacacgctggagaaggtcaac
gaggccaagagtctgatcgatgactccaagaggcaagtggacatcaaacaggagaagaac
cactctgtggatctcagtgaggagaaatcccatgatggccagaaccagaaccagttcctg
ccattctcctgccagttctgcaaggagagcttcactgggccgatcccgctgcaccagcac
gagcgctacctgtgcaagatgaacgaggacatcaaagcggtcctcaagccggctgagacc
agtcccgcgcgccgcaggggggcgatgtcctctgagctgcccactaacgagcggagcacc
agccccatcaaccccttcaaggaccacgtgtcagtgctcaaggcctacttcgccatgaac
actgagcccaactcagaggaacttctcaagatttcaattgctgtcggccttcctcaagag
tttgttaaggagtggtttgcccagtggaagagccaaaaccaccacggaggcggtctgagg
aaaaagtcgcccactcctgaccacggcggatcagacggaaaccacagcttaacccggtca
ccgttgtcacatcctgccgtagatttcattaatggcgacgcctcccacagactctcaata
aacaaccagtttacagccaacaggcagacaacaggggacaaaccactagaccccttggac
cacttgaggaacaacactccgtcacccctcaacctttcctccacttcctccaaaaactct
cagagtagctcttacactccaaacagcctagcctctgaggatgcccatggggatatacca
ctggatctgtcgctgcccaaacacatggcacagaggaagcgacacagacccaacggcttc
agcattgatcgcaacggtgagctgcaagtacaagaccaggcgtccaggcctctggatctg
gtccacatcaagaaggagatcctgggcgcagatggcggtgggaacgccatgcaccagctg
gagaaaagcaccagtccgatctttgggattaatcccttcacaggcagccccgtctacacc
tccctgccgactcacggagctttccctccgcctaccttcatgtctcctgcgcaggccacc
atcccgggcctcaggccatacccgggcctcgaccccatgagcttcctgccccacatggcc
tacacctacgccaccggggcggccacatttgctgaaatgcagcagaggagaaagtaccaa
cggaaaccaggtttccagggggagctgctggacgggacggcggactatctgtcaggcctg
gacgacctggcagacagcgattcgctgctctccaggaagaagattaagaagactgaaagt
ggtatgtacgcgtgtgacttgtgcgacaaaacattccagaagaccagttccctcctaaga
cacaaatatgagcacacagggaagcgtcctcaccagtgtcagatctgtaagaaggccttc
aaacacaagcaccatctcatcgagcactcgcggctgcactccggagagaaaccctaccag
tgtgacaagtgcggcaaacgcttctcccactcaggctcgtactcgcagcacatgaaccac
cgatactcgtactgcaagagggaggcggaggagcgcgaggcggccgagagggaggccagg
gacaaaggcggcggcggtggcagcagcgtggcggcgggcggcggcatggagcccaccgag
ctgctgatgaggagggcctacctgcagggcctggggccgctcggatactccgaccccgag
gaccagcaggaggacgccggcggcacgatcctgagagacggcagcgagggaagagtgagc
gagagggaagtggacaaatcgtacgaggacgtgacagacagacaggaagcaagttttagg
gaaggagaggaagaggaggaggaaggggggggcgacagcaggagccagatggactcgacg
agggacgacggcgagggcaaagacacgacgcagctgatggacgagagtttacgagaaggg
aagacagacggcaagtcggaccaggaggactga
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integrated database retrieval system
