Scomber japonicus (chub mackerel): 128368152
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Entry
128368152 CDS
T09718
Symbol
pcdh8
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sjo04515
]
128368152 (pcdh8)
Cell adhesion molecules [BR:
sjo04515
]
Cadherins
Protocadherins
128368152 (pcdh8)
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
128368152
NCBI-ProteinID:
XP_053184890
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All DBs
Position
11:complement(18866944..18870388)
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AA seq
967 aa
AA seq
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MGFCVGLCIVLVLCLYTVQCTTTRYVTYEEDAPGTEIGNLSQDLKIDPADDPDTSFRFMQ
ENNSSVIQMRETDGLLSVAEVIDREQLCPRSPRCFITFDTVAFSKEKFQLIHVEIEVKDI
NDHAPVFARNETTLEIVENVPLDSRFPLQIALDQDVGENYIQSYNISPSSHFAIEVRDRE
DGVKFSELVLVRQLDREVEDSYTIEVTAFDGGVPAKSGSVTVNIKVLDFNDNRPTFEHSS
LKVELNEDSPVGHRVVKVHAFDPDDGINGEVMYAFNGLSPEAARIFHIDPYSGDVTLKAP
VDFEKRRSYELNIKASDLGENSVPSSCKVVIDIVDVNDNAPEISIKPMTSSSDGVAYITE
AAAAESFVALISTSDRDSGSNGYVRISLLGHEHFSLQQAYGDTFMIITTTTLDREKIPEY
NLTVVAEDLGSPPFKTVTQYTIRVTDENDNPPIFSKSLYEVSVMENNIPGSYVTTLVARD
PDVGKNAKVSYKLIDSLVQGGSPVSTYVSVDSQSGSLYTLRSFDYETLKQIDLVIEAEDR
GSPSLSCKSTIRIRVVDQNDNYPHFTFPLLLNDSADISLPFNAPPGYLALHVSAEDEDEA
MNGELSYQIVQGDPKLFTMNKDTGEIALKQWLTAEIGDVLEMKIAVSDNGRSPLSASATI
RFVITDTEPSEDQVVIVLRSSDEEGSGLDGSLIVIIMLSGGCALLLIAIVAVIVTCKLSC
GGRNRGSKREVCHSLFDSRPMPMLGSTEPNIYTGQRGFFHERTSSSLDDSCLYEDRSGES
ETKMFLPSKHFQPSSVWQGDKYCLQVSGIGNTDQLSVKDSGKGDSDFNDSDSDISGDGGK
KNFSTFQPRLKSSSSATNSLSGDCQGTYCAIPAQSFRAPRDNAYTIGLSPVPVFNNPHGY
PVSWKDSSYGTNRPKSKSSAQTFSRTHTLPSYFPQQQRDASVSGTEIHQQSPNIVTVATA
LEVATMF
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgggattttgtgttggactctgcattgtacttgttttatgtttatacactgttcagtgt
acaactactaggtatgtcacctatgaggaggacgcaccaggcaccgagattggaaattta
tcacaagacttaaagattgatccagctgatgaccccgacacatcgttccgcttcatgcaa
gaaaacaactcttctgtgattcaaatgagggagacagatgggcttctgagcgttgcagaa
gtaattgaccgagagcagctctgccccagatctccgcgctgcttcatcaccttcgacact
gtggccttttccaaagaaaagtttcaactcatccacgtggagatcgaggtgaaagacatt
aacgaccacgcgcctgtgttcgcgcgcaatgagacaaccctggagatagtggaaaatgtg
ccgctggactcaagattccctctgcagatcgctctcgaccaggatgtgggtgaaaactac
attcagagctacaacatttctccctccagtcatttcgccattgaagtgcgcgatagggag
gacggggtgaagttttcggaactggtgctggtgaggcagctcgacagggaagtggaggac
tcctacaccatagaagtcactgcatttgatggaggagtgcctgcaaagtctgggtcagtg
actgtgaatatcaaagtgcttgactttaacgataaccgcccgacatttgagcacagctca
ctgaaagttgagctgaatgaagactctccggtgggtcaccgagttgtcaaagtgcacgct
tttgaccctgatgatggcattaacggggaggtgatgtacgcattcaatggattatcacca
gaggctgcacgcattttccacatcgacccgtactccggggacgtgactttgaaggcgccg
gttgattttgagaagagaaggtcatacgagctgaacatcaaagcctccgatttaggagag
aactctgtcccatccagctgcaaagttgtgatagacatcgtggacgttaatgacaacgca
cctgaaatcagcatcaaaccgatgacctccagcagtgacggagttgcttacatcacagaa
gctgcagctgcggagagtttcgtggctctcatcagcacctcggacagagactccggctcc
aacgggtatgtgcgaatcagcctgctcgggcacgagcatttcagcctccagcaggcgtat
ggggacactttcatgattattactactactaccttggacagagagaagatcccagagtat
aatcttactgtagttgcagaagacctaggaagtccacctttcaaaactgtcacacagtat
acaatccgtgtaacagatgagaatgacaacccccctatcttcagcaagtctctttatgaa
gtttcagtcatggaaaataatattccaggttcatatgtgaccactcttgttgcccgtgat
cctgatgtgggaaagaatgccaaagtctcttacaaactcatagattcactggtgcaagga
ggatccccagtgtccacttatgtttctgtagattcacagtctgggtctttgtacacttta
cggtcttttgactatgagactctcaagcagattgacttggtcatcgaagcagaagacaga
ggttccccctctctttcgtgcaaatcaacaatcaggattagagttgtggatcagaatgac
aactatccacacttcaccttccccctccttctgaatgactctgctgatatttctttgccc
tttaatgcacctcctggctatcttgccctccacgtctcagctgaagatgaggacgaggcg
atgaatggtgagctctcctaccaaattgtacaaggtgacccaaagcttttcacaatgaac
aaagatactggagaaattgctttaaaacaatggctgacagctgaaattggagacgtgctt
gaaatgaaaatagcagtgagtgacaatggcaggtccccgctctctgcaagtgccactatt
aggtttgtcatcacagacactgagccctctgaagaccaagtcgtcattgtgttgcggtca
agtgatgaagaaggctccggcttggatggctcactaattgtcattattatgctcagcggg
ggttgtgcattgttgctgattgcaatagtggctgttattgtcacatgcaaactcagctgt
ggagggagaaaccgtggctccaagagagaagtgtgccacagcctgtttgacagcaggccc
atgcccatgctcggctcaacagaaccaaacatatacaccggtcaacgaggcttcttccat
gagagaacctcttcttctctggatgattcctgcctgtatgaagacagaagtggggagtca
gaaacaaagatgtttctgccctccaagcatttccaaccatcatctgtgtggcaaggtgac
aaatactgcttgcaagtgagtggcattggcaacactgaccagctgagcgtgaaggacagt
ggcaaaggggacagtgacttcaatgacagcgactctgatatcagtggagatggaggcaag
aagaacttcagtaccttccagccaaggctaaaaagttcatccagtgccactaacagctta
tctggggattgccaaggcacctactgtgcgataccagcacaaagcttcagagcccccaga
gacaacgcatacacaataggcctctccccagtaccggttttcaacaatcctcatggctat
cctgtctcttggaaggattctagttatggcacaaatcgcccaaaatcaaagagcagtgca
cagactttctccaggactcatactcttccctcttacttccctcaacaacagcgtgacgct
agtgtttcaggcactgaaatccaccagcagagtccaaatattgtaacagtggctactgct
ttagaggttgcaactatgttttag
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