Scomber japonicus (chub mackerel): 128368158
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Entry
128368158 CDS
T09718
Symbol
trappc10
Name
(RefSeq) trafficking protein particle complex subunit 10
KO
K20307
trafficking protein particle complex subunit 10
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128368158 (trappc10)
Membrane trafficking [BR:
sjo04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
128368158 (trappc10)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
TPR_2
TPR_14
TPR_12
SNAP
TPR_1
TPR_7
Gryzun-like
TPR_19
TPR_8
Motif
Other DBs
NCBI-GeneID:
128368158
NCBI-ProteinID:
XP_053184897
LinkDB
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Position
11:29112032..29136935
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AA seq
1266 aa
AA seq
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MECQEEKPIIYTMENKPIVTCAGDQGLFTSLYTSLAQQLPREPMEWRRTYGRAPKMIHLE
ANFVQFKEELLPKEGNKALLTFPFLHIYWTDCCDTEAYKSTVKEDMLRWQNSLRTHSSAD
WVIIVVETNDTKKKNKTNILPRSSIVDKIRSDFCNKQNDRCVVLSDPLKDSSRSQESWNS
LLLKLRTLLLMSFTKNLGRFEDDMRTLREKRTQPGWSFCEYFMVQEELAFVFEMLQQFED
ALVQYDELDALFTQYVLNFGAGDTANWLGSFCAPVRSWSGLLLRRPIDMEKRDGIQRGEA
SLLDLRSYLFSRQCTLLIFLQRPWEVTQRALELLHNCVQELRLLEVSVLEGALDCWVFLS
CLEVLHRIEGCCDQAQLAANCSHTVGLWAYATDKLKSLGELCGLVSEKGPTSEDLNRTVD
LLAGLGDERPETVNSLQSPYKKLKEALSSVEAFERHYLELSHAAMEMYRAIGRLRSARLV
GKSLAEFYMRKGDPEKAETFLQEALKSYVSEGWSLPVTHTRKQIAECQKVLGRTVDYLQT
SALLAGDVNLTTEERKHFCQEILTYAGKSGDQSNKVSLSMGVFSQLTRLQFRPATASVHS
GAVLQVELTLRCLMPVSVHIQQVAASIHFDLEHAGTHGRSKGAQRQTNPGTVDFNQVSSS
AGPPSSSSSVGGPPLELDEIQDRSPSDNSLNSAGVVCKNTHLIMRRHDSNSPPDTPNCVS
PPAVTMKEGAQMLKVQDVTLEPGNNSIVFTAPSGQPGTYTLRQLCATVGQVQFVLPHIYP
SVQYEVYSQEPQLTVEPLSEPLLAGLPQTVKFTLLTGHYTVKKGDALQLSNTDTMPILPS
NSCTASISNPAAEVVGESVLSIQSSEKVTSISLPPTPPYHTLEFQLEVLCIIPSGLDRPP
NERLTNGEVRHRPRSYSHPDTPMTAIDQRMSIDCPWSIYSTLLALTFYIPFKTKHSLLSA
GNRKYIQVCVQNVSDVNFTLAEVKLTEKQHASLELQSLNTKTKQLLCSKHSVFCLWEVRW
KDDLPSCLQCVFSANFSPLDQDVSSFKPFHYQFQLERVTTLYSVRAEILPPAGEQHCRSG
LLCGLEVCITRLSEPAEGEMAEESKTDTDGLKTTKLMYEVADSSSNWAVCGKSSGMVSMP
VSANATHKVQIEVMPLFAGHLPFPKIKVLKYLPHTAAVAIQPDPDSCVENDSLSLLDKTL
DDQGDTASIRSRGSVHSVGSGEQQQKGVAMPRLEPFSPGQVFNHSQTRQVLVLPATDDHI
MEVNAT
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtcaagaggaaaagccgatcatctatactatggaaaacaagccgattgtaaca
tgtgctggagaccagggcttgtttacgtctctctatacctcattggcccaacagcttccc
cgggagccaatggagtggaggaggacatacggccgagctcctaaaatgatccacctggag
gctaactttgttcagtttaaagaggagctgctccccaaggagggtaacaaggccctgctc
accttccccttcctccacatctactggactgactgctgtgacacagaggcatataagagc
acggtgaaggaggatatgctgcgctggcagaacagcttgcggactcacagctcagcagac
tgggtcatcatcgtcgtggagaccaacgacacgaagaagaagaataagaccaacatcctg
cctcgctcgtccatcgtggacaagatccgcagcgacttctgcaacaagcagaacgacagg
tgcgtggtgctgtcggatcctctgaaggactcctcccgctctcaggaatcctggaattcc
ttgctgctgaagctgcggaccctcctcctcatgtccttcaccaagaacctgggccgcttt
gaagacgacatgcgcacgctccgagagaaacgcacacagcctggctggagcttctgtgaa
tacttcatggtccaggaggagcttgcctttgtatttgagatgctgcagcagtttgaggac
gcccttgtccagtatgatgaactagacgctctttttacccagtacgtccttaactttgga
gctggagatacagccaactggcttggctcgttttgcgctccggtgcgaagctggagcggc
ttactgctgcggcggcccatcgacatggagaagagggacgggatccagcgaggggaggcc
agcctactagacctgaggagctacctgttctcccgccagtgcactttactcatcttcctc
cagaggccctgggaggtgactcagagagcactggagctgctgcacaactgcgtccaggag
ctacgtctgctggaggtgtcggtgctggagggggcgctggactgctgggtgttcctcagc
tgcttggaggttctacacaggatcgagggctgctgcgatcaggcccagctggctgcaaac
tgctcccacactgtcggcctgtgggcctacgctactgacaagttgaagtctctgggtgaa
ctgtgtggcctggtgtcagagaagggtcccacgtctgaggacctgaacaggaccgtggat
ctgctggctggactgggagatgagaggcctgagactgtcaacagtctgcagagcccttac
aagaagctaaaagaagcgttgtcatcagtggaagcttttgaaaggcactatctcgaacta
tctcatgctgctatggagatgtacagggccatcggtcgactgaggtccgccagactggtg
ggaaaaagcctggctgagttctacatgaggaagggggaccctgagaaggcagagaccttc
ttacaggaagctctgaagtcgtatgtatcagagggctggagtctccccgtcactcacacc
aggaaacagatcgctgagtgtcagaaagtgctgggcagaactgtagactacctgcagacc
agtgccttgttggcaggcgatgtgaatctgaccacagaggagaggaagcacttttgtcag
gaaattttgacctatgccggcaagtctggagatcagtctaacaaagtgtctctcagcatg
ggcgtcttctctcagctcacgcggctacagttccgtccagccacagcttccgttcactcc
ggagccgtcctgcaggtggagctcaccctgcgatgtctgatgcccgtctcggtgcacata
cagcaggtcgccgccagcatccacttcgacctggagcacgcagggactcacgggagatcc
aagggagctcagagacaaacaaacccagggacagtagactttaaccaggtcagctcgtcg
gcggggcccccctcttcctcttcctcggttgggggcccccctttagagctggacgagatt
caggacaggagtccgtcggacaattctctcaactcggcgggggttgtgtgtaagaacact
cacctgatcatgcgtcgccatgacagcaactcgccgccagacacacccaactgtgtcagc
cctcctgctgttactatgaaggaaggagcacagatgctgaaagtgcaggatgtaacgtta
gagcctggaaataacagcatcgtatttacagcaccaagtggacagccaggtacttacacg
ctacgtcagctgtgcgccacagtaggtcaggtgcagttcgtgcttcctcacatctaccca
tcggtccagtatgaagtctattctcaggagccccagctgactgtggaacctctctcagag
ccgctgctggctggtctgcctcagacggtgaagttcactctgttgacgggtcactacacc
gtgaagaaaggagacgctctgcagctcagcaacacagacaccatgcccatcctgccctcc
aacagctgcaccgcctccatcagcaaccccgccgctgaggtggtgggcgaaagcgtcctc
tccatccaatcgtccgagaaggtgaccagcatcagcctgccccccacgcccccctaccac
accctggagttccagctggaggtcctgtgcatcatcccgtccgggttggaccgccccccc
aacgagaggctgaccaacggagaggtccgtcaccggccacgcagctacagccacccagac
acgcccatgaccgccatcgaccaaaggatgtctatcgactgtccgtggtccatctactcc
acgctgctcgccctcaccttctacatccccttcaagaccaaacactcactgctttctgct
ggtaacaggaagtacatccaggtgtgtgtgcagaacgtgtcagacgtgaacttcactctg
gcagaagtgaagctgacagagaagcagcacgcctcgctggagctgcagtccctcaacact
aaaactaaacagcttttatgcagtaagcacagtgtgttctgcttgtgggaggtgaggtgg
aaggacgacctgccttcttgcctccagtgcgttttctccgccaacttctctccgctcgac
caagacgtctcctccttcaaacccttccactaccagttccagctggagagagtcacgacg
ctgtacagtgtgagagctgagatcctgcctcctgccggcgagcagcactgtcgctccggt
ttgctctgcggactggaggtgtgtatcacacgactgagcgagcctgctgagggagagatg
gctgaggagagcaagaccgacactgatggcctcaaaaccaccaaactcatgtatgaagtg
gcagacagcagcagtaactgggcagtgtgtgggaagagttcagggatggtgtccatgccc
gtctctgcgaacgccacacacaaggttcagatagaggtgatgcctctgtttgctggacat
ctgcctttccccaagatcaaagtgctcaaatacctgccacacactgctgcagtggctatc
cagccagaccctgacagctgtgtggagaacgacagtctgtctctactggataagacgctg
gatgaccagggagacacggccagcatccgcagccgaggcagcgttcactctgtgggcagc
ggggagcagcagcagaagggcgtggccatgcctcgcctggaacccttcagcccaggacag
gtattcaaccacagccagacccggcaggtcctggtgctgcccgccaccgacgaccacatc
atggaggtcaacgctacatga
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