Scomber japonicus (chub mackerel): 128368161
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Entry
128368161 CDS
T09718
Symbol
spopla
Name
(RefSeq) speckle-type POZ protein-like A isoform X1
KO
K10523
speckle-type POZ protein
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
128368161 (spopla)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128368161 (spopla)
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
128368161 (spopla)
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
128368161
NCBI-ProteinID:
XP_053184900
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Position
11:complement(11360236..11373937)
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AA seq
392 aa
AA seq
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MSRVPTPPPPGEMSSGPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSSG
PNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQSNMNMLK
VPECQLSDDLGNLWECSRFTDCSLYVRGQEFKAHKSILAARSPVFNAMFEHEMEESKKNR
VDISDVDPDVFKEMMGFIYTGKAPNLEKMADNLLAAADKYALERLKVMCEEALCNSLSVE
NVADTLILADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNSNHATDIMETAGWKSMI
QSHPHLVAEAFRALASAQCPPFGLPRKRLKQS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgggttcccaccccccctcctcctggggagatgtcaagtggacctgtggcagag
agctggtgttacacacaggtcaaagttgtaaagttttcctacatgtggaccataaacaac
tttagtttttgcagagaagaaatgggggaggtgttgaagagctcaaccttctcctctggc
cctaatgataaaatgaaatggtgtctgcgagtcaatccaaagggacttgatgatgaaagc
aaagattatctgtcattgtatttacttcttgttagttgtccaaaaagtgaagtcagagca
aagttcaagttttctttgttgaacgctaaaagagaggagacaaaagcgatggaaagccaa
agagcatacaggtttgtccaaggcaaagactggggcttcaaaaaatttatcagaagagat
tttctccttgatgaagccaatggacttctgccagatgataagctcacactgttctgtgag
gtaagcgtcgtccaggactctgttaacatttctggccagtccaacatgaacatgctgaag
gtaccggagtgtcagctgtctgatgacctggggaacctgtgggagtgttcacgcttcaca
gattgcagcctctatgtgagagggcaggagttcaaagcccacaaatccatccttgcagca
aggtccccagtctttaatgctatgtttgaacatgaaatggaagaaagtaaaaagaaccgt
gttgacattagtgacgtagacccagatgtctttaaggaaatgatgggctttatctacacg
ggaaaggccccaaacctggaaaagatggcagacaatttgctggcagctgcagacaaatac
gcgctggagcgtttaaaggtcatgtgtgaagaggccttgtgcaacagcctttcagtggag
aatgtggccgacaccctcatcctagcagacttgcacagtgccgagcagctcaaagcacaa
gccatagattttatcaacaggtgcagtgtcctgagacagctgggctgtaaagatggaaag
aactggaatagcaatcatgctacggatataatggagactgcaggctggaagtcaatgatc
cagtcccaccctcacttggtagccgaggcctttcgtgccctggcttcagcacagtgccca
ccctttggtcttcccaggaagcgtctaaaacagtcctga
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