Scomber japonicus (chub mackerel): 128368190
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Entry
128368190 CDS
T09718
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3
KO
K15195
AF4/FMR2 family member 3
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sjo03021
]
128368190 (aff3)
Transcription machinery [BR:
sjo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
128368190 (aff3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
128368190
NCBI-ProteinID:
XP_053184932
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All DBs
Position
11:complement(21335990..21352359)
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AA seq
1214 aa
AA seq
DB search
MPTVLGGKGKLSIVSFLLRCAYSQVTRSQHNSCAKDILEDMTQSWPSQQALGGDQTQRIL
YNHKDGKQSTTQQRQNRGDVPLRMTRHPHVAPHKSMLADDLKLSSDEDDTQRATDESATW
DGHSLSAQRAHTHSRRVRHSSSDSSGSDSTAESVSSSFHSRSSSPEAHPDPASPANTQPP
RDNKETNHPSAAQWQLDKWLKKSRKKTAISEHYPAQSNPGRLPSPHTQRAPSPARCWDSN
QEYSPSQSPIPSPQFNYSHNSSPLPSPGYSFCPSPSPFPSTCPSPSPSPRHSSIPSPVPS
VCPSPCGSPRASRSPSPIPLGRDPPRSPSPSLPPSRVRHYPEVQSHHQLNQTQPSATTTP
HRTKSRSWFATLPNTDSKSKPTNSTQPKSRPAQNHDQSQNKSKAPAVLDSNDSQSHKSRS
KPNFHPSSKQLVEPPKAKQTHFGQNSFSSNSKHKNRPTVQPRSQHSPTRAKNLAPSSRTG
HSSHSQSTSKAVSYSNTGSNFRSSPSLKPKATVPAPVHGIQSKTTQKKPQSKEREVDHRE
ANLTQAEGRKHERKEDRHKQVEQGKQERKEDRRLAEEQLLRRPWIQSSEDEDEEEEEGAK
ERQRRREETERAENRRRREQQHRHEWQTVQAKHRLPTSIERHHPQDNSQHPGRTNKGGRS
EKERPSHPDPSPTPSRTLTHPPSSSSSASSSSNSDSESEYQAQITKVPADSTSHNRLTQR
GQRGPGRTDTNRPKVVHPSGPTSSNPSEGQQSEGKQKLYTLVPFGRGDKATASHQRGLRN
LVVQIDLCLLKRVPDSTTNSPVKKPSSSSTKDKQTEAMKHLFMPDTETKDGKRKRKLENG
VSHKESKRSIPYTNDLSGHTESSFQAEHNFSSVTTHNGYLVEYLDSKRPLSPLSPLSDSP
ESNKLSTKTKKAEVHHIHNHKNKDKNRDSAVKPKMEVECVKVSGQPQPPSESWGPAGHRG
TMPNHETTHHAEYYLHEAKRMKHRADAMVDKLGKAVNYIDAALSFMECGKAMEEGPLEAK
SPYTMYSETVELIRYAMRLKSHSGPGARQEDKQLAVLCFRCLALLYWQMFRLKKDHALKY
SKVLLDYFKSSPKVPITPPGWNDTEKDIGGPPSSLSPNAKHLRRGSHGGTTSPSLISIPQ
RIHQMAANHLNITNSVLYSYEYWEVADNLAKESKEFFNYLNTLSGPLTLHSSIAHAVQYT
RQALQWIRISAKLN
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgtcctcggtggcaaagggaaactttccattgtctcttttttgctccgatgc
gcatattctcaggtaacaagaagccaacacaacagctgtgccaaagatattctggaggac
atgactcagtcctggccgtcccagcaagccttagggggtgaccagacccagcgaattctc
tacaaccataaggatggaaaacagtcaactacacaacaaaggcaaaatcggggggatgtt
ccactacgaatgacccgtcacccccacgtggcgcctcacaaatcgatgcttgctgatgac
ctgaagctgagcagtgatgaagatgacacccaaagggcgactgatgagtcagcaacctgg
gatggacacagcctgtcagcacagcgagcgcacacacatagcaggcgggtgagacattcc
agctcagactcctcaggctcagactccactgctgaatcggtgagcagtagttttcattcc
aggagctccagcccagaagctcacccagatcctgcatcgcctgccaacactcagcccccg
cgtgacaacaaggagaccaatcacccctctgctgcccagtggcagttggataagtggctg
aagaagtcccggaaaaaaactgccatcagtgagcattatccagcccagagcaatccagga
cgcctgccctctccacacacccagcgggccccatctccagctaggtgctgggacagcaat
caagaatacagcccgagccaaagccctattcccagcccacagttcaattacagccacaac
agtagccccttaccgagccccgggtacagcttctgccccagcccaagcccattccccagc
acctgtccaagtcctagccctagtccaaggcacagttcgatccccagtccagtaccaagt
gtttgcccaagtccgtgtgggagcccgagagctagccgtagccctagccctatacctcta
ggtagagatcctcccagaagcccaagtcccagcttgcctccttccagggtccgtcactac
cccgaggttcagagtcatcatcagctgaaccaaacgcaacctagcgcaacaaccactccc
cacaggacgaaaagtaggtcatggtttgctacgttgcctaacactgattccaagagcaag
cccacaaatagtacacagcctaagtctagacctgcacagaaccacgaccaaagccaaaat
aaatccaaggcccctgcagttttggactctaacgatagtcaaagccacaaatctagatct
aagcctaattttcatccaagctctaaacaacttgttgagcctcccaaagccaaacagacg
cattttgggcaaaatagtttttcgagcaactctaaacacaagaaccggcctacagttcaa
cctagatcacaacatagtcccacaagagcaaagaatttagctcccagtagtcgaactggt
cacagttctcattcccaatccacctctaaagctgtcagttattctaatactgggtcgaac
tttagatccagtcctagcctaaaacctaaggctacagtcccagctcctgtgcatggtatt
caaagcaaaacaacacagaagaaaccccagtccaaggaacgggaggtagaccatagagaa
gctaatctaacccaagcagaggggagaaaacacgagagaaaagaggacagacataagcaa
gtcgaacaagggaaacaggagagaaaggaagacaggaggctggcggaggagcagctactg
agacgtccgtggatccagagttcagaagacgaggacgaggaagaggaggaaggagcaaag
gagaggcagaggaggagagaggagacagaaagagcggaaaacagaagaagaagggagcag
caacatagacacgaatggcaaacagtccaggccaaacacagactgcctaccagcatcgag
cgacaccaccctcaagacaactcacaacacccaggcaggacaaacaagggagggagaagt
gaaaaggagaggccatcacacccagacccttcacccactccttcacgtaccttgactcat
ccaccatcttcctcatcctctgcctcttcctcttcaaattcagattcagaatctgaatat
caagcccaaatcaccaaagttcctgcagattctacctcccacaatagactcacccagaga
ggccaacgaggcccaggcagaactgacaccaacagaccgaaggtggtgcacccaagtgga
cccacctcaagtaacccaagtgagggacagcagagtgaggggaagcagaaactttacacc
ctggtcccatttgggcgaggtgacaaggccacagcgtcccatcagcgcgggctgagaaat
ctagtggtacagatagacctctgtcttctcaaaagggtcccggacagcactactaattcc
cctgttaagaaaccttcctcttcatccaccaaggacaagcaaacagaggctatgaaacac
ctatttatgccagacactgagacgaaagacggcaaaaggaaacgcaagctggagaatggt
gtgtcacacaaagaaagcaagaggagtattccttatacgaatgacctctcaggccacaca
gagtcttcatttcaagctgagcacaacttttcgagcgtgaccacacacaatgggtacttg
gtggagtacttggatagtaagaggccattgtcacccctgtctccactgtcagacagccct
gagtccaacaagctgtccaccaaaacaaagaaagctgaggtgcatcacattcacaatcat
aagaacaaagacaagaatagagattctgctgtaaagcctaagatggaggtggaatgtgta
aaagtgtcaggacagccccagccaccgtctgagtcctggggccctgcaggacacaggggg
accatgccaaaccatgaaactacccaccatgctgagtactacttacatgaagccaaaagg
atgaagcatcgtgcagatgcaatggtggacaagcttggaaaggctgtgaattacattgat
gctgctctctctttcatggaatgtgggaaggcaatggaggaagggccacttgaggcaaag
tctccctatacaatgtactcagagactgtggagcttataaggtacgcaatgaggctaaag
agccactccggccctggggccagacaggaagacaaacagctggccgttctgtgtttccga
tgccttgccctcctttactggcagatgtttcgtttaaagaaggaccacgcattaaaatac
tcaaaagtactgctggactattttaagagttcccccaaagtgcctataacgccacccggt
tggaatgacactgagaaggatatcggaggacccccttcttcgctctcacccaatgccaaa
cacctcagacgaggttcacatggaggcaccacctctccctctcttataagcattccccaa
cgtatccaccagatggcagcaaaccacttgaacattaccaatagtgtgctgtacagctat
gagtactgggaggtggcagacaaccttgcaaaggagagtaaagagttcttcaactacttg
aatactttgtctgggccactgacgcttcacagtagcattgctcatgcagtccagtacacc
agacaagctctccagtggatccgcattagtgccaaacttaactaa
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