Scomber japonicus (chub mackerel): 128368229
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Entry
128368229 CDS
T09718
Symbol
adarb1b
Name
(RefSeq) double-stranded RNA-specific editase 1
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128368229 (adarb1b)
Spliceosome [BR:
sjo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
128368229 (adarb1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
128368229
NCBI-ProteinID:
XP_053184984
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All DBs
Position
11:complement(8900732..9019265)
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AA seq
698 aa
AA seq
DB search
MDVDEEENMSSSSTDVKENRNLDNVSCKDGVGVAEQLPNGSGLGSRKRPLEEGNNGHSHS
KFRAKKRKKTPGPVLPKNALMQLNEIKPGLQYKLLSQTGPVHAPVFVMTVEVNGQMFEGM
GPTKKKAKLNAAEKALRSFVQFPNASEAHLAMGRTLTVNTDFTSDQADFPDMLFNGFETP
AVPEESFYLGSNGSSSLNSLGEYPLPTPPGSNLVQAPLPPPSAFSSPSSGKNPVMILNEL
RPGLKYDFVSESGESHAKNFVMSVTVDTQTFEGSGRNKKLAKARAAQAALSALFNMQLDQ
TPSRQPIPREGLQLHLPQVLADAVSRLVVDKFSELTDNFTSPHARRKVLAGVVMTTGTDV
KEAQVICVSTGTKCINGEYMSDRGLALNDCHAEIIARRSLMRYLYTQLEFFLSNSKDEHQ
SSIFMHCDKGGYRLKDNIQFHLYISTSPCGDARIFSPHEAGVEDQGDRHPNRKARGQLRT
KIESGEGTIPVRSSNTIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGSLMSYFTEPIYF
SSIILGSLYHADHLSRAMYQRIADIEDLPQQFTLNRPLLSGISNAEARQPGKAPNFSVNW
TVGDQALEVINATTGKDDMGRASRLCKHALYSRWVRLHSKLSSILRIKVLRPSSYHEAKQ
AATEYHSAKQALIKAFHKAGLGAWVKKPIEQDQFTLCS
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggatgaggaggagaatatgagttcgagcagcaccgacgttaaggaaaaccga
aacctggacaacgtgtcctgcaaagacggtgtgggtgtggctgaacagctccccaatgga
agcggcctgggcagtcgaaagcggcccttagaagaaggaaacaatggccactcgcactcc
aagttccgggccaagaagcgtaagaaaacgccgggacctgtcctgcccaagaatgctctg
atgcagctgaatgaaatcaaaccaggtctacagtacaaactgctgtctcagacaggaccg
gtccacgcaccagtttttgtcatgaccgtggaggtcaatggacagatgtttgagggcatg
ggcccaacgaagaagaaggccaaactgaatgcagctgagaaagcactgcgttccttcgtc
cagttccccaatgcctctgaggcacacctggccatgggtcgaacactgacagtgaacaca
gactttacatctgaccaagctgacttcccagacatgctcttcaatggctttgagacacca
gccgtacctgaagagtccttctatctaggctccaatggtagcagctcattaaactcacta
ggggagtacccacttcccacaccacctggcagtaaccttgtccaggcaccattgccccct
ccatcggcattcagctcaccctccagtggcaaaaaccctgtcatgatcctcaatgagctc
aggccgggcctcaaatatgactttgtgtcggagagcggtgagagtcatgccaagaatttt
gtgatgtcagtgacagtggatacacagacgtttgaaggctcagggcgcaacaagaagctg
gctaaagcccgggcagcccaggccgccctctcagctctcttcaacatgcagttagaccag
acaccatcccggcaacccataccaagagagggattgcagcttcacctaccgcaggttctc
gctgatgctgtctctcgcctggtggtggataagttcagtgagctgacagacaacttcacc
tccccccatgcacgacggaaagtcctagcaggggtcgtcatgacaacagggacagatgtg
aaggaggcacaggtaatttgtgtctccacaggaaccaaatgcatcaacggtgagtacatg
agcgaccgtggcctggcactcaatgactgccatgctgaaataatcgcccgacgctcgctc
atgaggtacctctacacccagctggagttcttcctcagcaacagcaaagacgaacatcag
agctccatattcatgcattgtgacaagggaggctacaggttaaaggacaacatccagttc
cacctctatatcagcacctcgccctgcggagacgccaggatcttctctccgcacgaggcc
ggagtagaagaccaaggagacagacatcccaaccggaaagcacgaggccagctaaggacc
aaaattgagtcgggggagggcaccatccctgtgaggtccagtaacaccatccagacctgg
gacggcgtcctgcagggagagaggttactcaccatgtcctgcagtgacaagattgcaagg
tggaacgtggtgggcatccagggctctctgatgagctacttcacagagcccatctacttc
tccagcatcatcctcggcagcctttaccacgccgatcacctctccagagccatgtaccag
cgcatcgcagatatagaggacctgccccaacagttcaccctcaacagacctctactcagt
ggtattagtaatgcagaagccagacagccaggcaaagccccaaacttcagcgtgaactgg
acggtgggtgaccaggcgctggaggtgatcaacgcaaccaccggcaaggacgacatgggc
cgcgcttcacgcctctgcaagcacgccctgtacagccgctgggtgcgcctacactccaag
ctgtcatccatcctgaggatcaaggtgctcaggcccagctcctaccatgaagccaagcag
gcagccacagagtatcactccgccaagcaggcgctcatcaaggctttccacaaggccggc
ctaggggcatgggtcaaaaagcccattgagcaagaccagtttaccctctgctcctga
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