Scomber japonicus (chub mackerel): 128368253
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Entry
128368253 CDS
T09718
Symbol
chaf1b
Name
(RefSeq) chromatin assembly factor 1 subunit B
KO
K10751
chromatin assembly factor 1 subunit B
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjo03036
]
128368253 (chaf1b)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
128368253 (chaf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
WDR55
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
CAF-1_p60_C
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
B-prop_COPA_B_2nd
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
eIF2A
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
128368253
NCBI-ProteinID:
XP_053185014
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All DBs
Position
11:19601738..19610175
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AA seq
615 aa
AA seq
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MKVVTCEIAWHNKEPVYSLDFQHSCDGRIHRLATAGVDTTVRLWRVDMGPDGKAVVEFLS
NLARHTKAVNTVRFSPNGELLASGGDDAAILLWKLNDSKEPEQAPMFQEDEDAQLNKESW
SVVKTLRGHIEDVYDISWTRDGNFMVSGSVDNTAIMWDVNKGQKLCILNDHKSYVQGVAW
DPLGQYVATLSCDRVMRVYSTHTKKKACCISKMSSGTPTEGEAKQYRMFHDDSMRSFFRR
LSFTPDGSFLLAPAGCVEVGENIMNTTYIFSRKGLKRPIAHLPCPSKATLAVRCCPVYFE
LRTKKGEDGSIQTLPNVFQLPYRMVFAVASEDSIFLYDTQQTLPFGLVSNIHYHTLSDLT
WSGDGSFLAVSSTDGYCSFLSFSPGELGTPLKEPPTLEVFVPNSGVEKKGKKTSAARTSS
PVSQPSCTTPIPTNQTSLGKDTPSSVTTPEEKKGTPSAKSKPQPRRITLNTLEGWGKPTT
PKATTPSAPQTPTSASTSAPSTPQPNVTHLTPTSSKTQPRITPLTPSTPKVLNSANTPGP
TTPKGTTTPKGPTPRRVSLTPVASRSSSSLFNNPSSTEKAKHERPSPPSDPVCQPPESKR
PKTRDPPAKDRVTQA
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtggtaacgtgtgagattgcgtggcacaacaaggagccggtgtacagtctggac
ttccagcacagctgtgatgggcgcattcaccgtctggccacagctggagtagacaccaca
gtcaggctgtggcgggtagacatgggaccagatgggaaggcagtggtggagtttctgtct
aatctggctagacacacaaaggctgtcaacactgtgcgcttcagccccaacggagagctg
cttgcctcaggaggagatgatgcagcgattcttctgtggaagctcaatgacagtaaggag
cccgagcaggcccccatgtttcaggaggatgaagatgctcagctcaacaaggagagctgg
tctgttgtcaagacactaaggggacacatagaggatgtgtatgacatcagctggacccgg
gatggaaacttcatggtctccggctctgtagacaacacagctatcatgtgggacgtcaac
aaaggacagaaactttgtatcttgaatgaccataagagctacgtgcagggggtggcctgg
gatcctctgggccagtatgttgccactctcagttgtgacagggtgatgcgtgtgtacagc
actcacaccaagaagaaggcctgctgtataagtaaaatgagctctgggacacctacagag
ggagaggcgaagcagtacagaatgttccacgatgacagtatgaggtcgttctttcgacgc
ctttcgttcacaccagacggctctttcctgcttgctccagctggatgtgtggaggttgga
gaaaacatcatgaacaccacctacatcttttccaggaagggcctcaagaggcctatcgcc
cacttgccatgtccaagtaaagctacgctagctgtgcgctgctgtcccgtctacttcgaa
ctgaggaccaagaaaggagaagacggttccatccagactcttccaaatgtattccagttg
ccgtaccggatggtgtttgcagtggcgtctgaggattccatcttcttgtatgacacgcag
cagacccttcctttcggcctggtgtccaacatccactaccacacactgagtgatcttaca
tggtctggtgatggctccttcctggctgtgtcctccactgacggctattgctccttcctg
tccttctctcctggggagctgggcactccgctgaaggagcctcccacgctagaggtcttt
gtcccgaacagtggcgttgagaaaaaaggcaagaagacatcagcagctaggacctcctct
cctgtatcacagccatcttgcactaccccaattcccacaaaccaaaccagcctgggcaaa
gacaccccctcctctgtcacaaccccagaggagaagaagggcacacccagtgccaaatcc
aaacctcagccgcgcaggatcaccctcaacaccttagagggctgggggaagcccactact
ccaaaagccacgactccttcagcacctcagacacccacgtctgcaagcacaagcgcaccc
tctactcctcaacccaatgtcacccacctcacccctaccagctccaaaacccagccacgc
atcactcccctcactccctccacccctaaagtcctcaacagcgctaatactcctgggccc
acaactcctaagggtactactactccaaaagggcccaccccaaggcgagtatccttgact
cctgttgcatcccgttcttccagctcactcttcaacaatccctcctccactgagaaggcc
aaacatgaacgtccctctcctccgtccgatccagtctgccagcctccagagtccaaacgc
cccaagacccgtgaccccccagcaaaggaccgtgtcacccaggcttag
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