KEGG   Scomber japonicus (chub mackerel): 128368264
Entry
128368264         CDS       T09718                                 
Symbol
si:ch211-214p13.3
Name
(RefSeq) nectin-4
  KO
K06081  poliovirus receptor-related protein 1
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo03266  Virion - Herpesvirus
sjo04514  Cell adhesion molecule (CAM) interaction
sjo04517  IgSF CAM signaling
sjo04520  Adherens junction
sjo05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    128368264 (si:ch211-214p13.3)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    128368264 (si:ch211-214p13.3)
   04517 IgSF CAM signaling
    128368264 (si:ch211-214p13.3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    128368264 (si:ch211-214p13.3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    128368264 (si:ch211-214p13.3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:sjo04515]
    128368264 (si:ch211-214p13.3)
   04090 CD molecules [BR:sjo04090]
    128368264 (si:ch211-214p13.3)
Cell adhesion molecules [BR:sjo04515]
 Immunoglobulin superfamily
  Nectin family
   128368264 (si:ch211-214p13.3)
CD molecules [BR:sjo04090]
 Proteins
  128368264 (si:ch211-214p13.3)
SSDB
Motif
Pfam: Ig_3 V-set ig I-set Ig_2 C2-set_2 C2-set_3 Ig_5 Ig_4 Ig_PDGFR_d4 DUF4578
Other DBs
NCBI-GeneID: 128368264
NCBI-ProteinID: XP_053185027
LinkDB
Position
11:complement(19738387..19764207)
AA seq 401 aa
METQFLYLSSSGTYRRSQARCVTWSYNLLFVVYVCLIILVIRDIEGVQVTGGDVTVVQGG
AIILPCKLTDTVESLTQISWQRKTREKPQNKNFFIIPATNGPRFVDGHDDRFQFVGSISD
FNGSLQISRATLMDEGVYTCIFTLFPSGNYKAEINLNLLVPPVTSLKDNCPVLGNVEASL
VTCTAEGSRPSAEVTWHTGTLKEKVRTATNSTQHANGTTTTESSLFGVPTREISQQQVQC
VITSKALQKEETLPFTIQVYFSPREVTINKSDDSFQCLSEANPPANFTWSRPDGLWPKSA
VAEGATLRFSSMTSDLNGEYQCEASNQYGRKYSHLYLHVSSGHCSTCWTLFSILLILIVF
GAAAVWYRRTKVPSTAQSIDVLYIVLLLNKQAYVCSYFVLY
NT seq 1206 nt   +upstreamnt  +downstreamnt
atggagacacagtttttgtacctgtcctcctccgggacctacaggaggtcacaagcacgg
tgtgtcacttggagctacaacctgctgtttgtggtgtatgtatgcctaattatcctggtc
atcagagacatagagggtgtccaggtgactggaggagacgtaactgtggtgcaaggaggg
gccatcatcttaccttgcaaactcactgacacagtagagagcctgacacagatttcctgg
cagaggaagacaagagaaaaaccacaaaataaaaacttttttataattcctgccacaaat
ggaccacggtttgttgatggacatgatgatcggtttcaatttgttgggagcatttctgac
ttcaatggatctctccaaatatccagggccacactcatggatgaaggtgtctacacatgc
atctttactttgtttcccagtggaaattacaaggcagagataaatctgaacctgcttgtg
cctccagtcacaagcttgaaggataattgtcctgtcttgggtaatgtggaggcttccctc
gttacttgcacagctgaaggttcccggccttctgcagaggtgacgtggcatactggtacc
ctgaaagaaaaggtgaggactgcaaccaattccacccagcatgctaacggtacgaccacc
acagagagctcgctgtttggagtacccaccagagaaatcagccagcaacaggtccagtgt
gtcatcaccagtaaagccctgcagaaagaggagactctgcccttcaccatacaggtctac
ttttcaccaagagaagtgactatcaacaaatccgacgactcatttcaatgcttatctgaa
gctaaccctcctgccaactttacctggagcagacctgatgggttgtggcctaaatctgct
gttgcagagggtgcaacgctacgcttctctagtatgacctctgacctgaatggcgagtac
caatgtgaagcatcaaatcaatacggaagaaaatacagccacctttatttgcatgtgtct
tcaggacactgcagtacatgttggaccttattcagtattttgcttatcctgattgtcttc
ggagctgctgcagtgtggtaccgacgtaccaaggtaccaagtacagcacaaagcatcgat
gtactgtatatagtacttttgctcaacaaacaagcatatgtatgtagttattttgtttta
tattaa

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