Scomber japonicus (chub mackerel): 128368409
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Entry
128368409 CDS
T09718
Symbol
obsl1b
Name
(RefSeq) obscurin-like protein 1
KO
K19574
obscurin-like protein 1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjo03036
]
128368409 (obsl1b)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
128368409 (obsl1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
V-set
Ig_MYOM1
VEGFR1-3_N_Ig-like
Ig_6
Ig_4
Ig_5
C2-set_2
Izumo-Ig
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
128368409
NCBI-ProteinID:
XP_053185183
LinkDB
All DBs
Position
11:7647747..7684725
Genome browser
AA seq
1979 aa
AA seq
DB search
MDVFGGAPRFLAYPRPVMVQSGTDAVLKCQIGGDPRPAVIWERNNEKIDPQERYRVFEDG
NVYNLIISAVTTEDSGQYICKAKNSIGETYAAATLKVEGEAQEMELREENKPRFLIKPLS
TRVGRGEDAVFSCKLWGNPRPEVVWEKDGRKLNEIFESTHFSVGYQDGGWFQLKIFKTRA
PDGGVYTCKARNEFGEALAGAVLLVDAGPGHEDDGNRNGYTNGHWKGHQGKQRSGRQVSN
RLKDDPLTKSTKVKMFAVTEGKHAKFRCFVTGKPKPEIIWRKDGRLILSGRRYLLYEDRE
GYFTLKVLYCKQKDNGVYVCAASNTAGQTLSAVHLTVKEPPVRFKQPLIDLEVWERDLAV
LECEVPEDSVPITWYLEDRRLQPGAKYGMEEWGTKRRLTIRDIGVDDDGIYLCEMPDGGR
SIAEVAVKGTILRKLPRKVDVLEGENAAFCVEVEKEEMDIHWYKDGVELRETHKTILKSF
GRTHILVFVNTMPQDSGLVIFLVGRSKTSSQLRVKAARHCPPSCPVGVQINTERANAALL
SWVPAQDSRKNPPSGYVLERQEVGTGSQEWLQCLTTDSATSVEILGDSVPCEADYRFRIC
SVNKYGKSNNVEFPRAVHLVPVARIQAPLQDALVPEGQDGLFSIELSASVIGTWFLNGTQ
LQEDERYSMRRTRTHQSLRIRGVRDTDNGAEITFIAYGIRDSAALYIQAPLVKFSPLSEM
DRNKFVEIGNPIVLYCELSDPAAPVHWYKNGVELQTVEGLHIQSEGTMRRIVIQSAEFSH
SGVYCCDAIDDVIRFNVEVEAPPVTFADIPEEDLFKSVVEQEELALSCEVSRADSVVQWY
KDGIEVQLSDNITIQAEGTQRNLTIHSAQLSDSGTYTCRAGDNILMFKVNIREPPVTIIY
PKEDVHLDRHVPEEIILSCELSRPNGVVSWFKDGQKLQESENIKLKVEGPYRRLKIISSG
VEDSGEYVCDTADDSIFFNLSITEPPVRIVSPSQSQMELCQQTSERMVLSCEISRPNAMV
RWYRDGLEVEENDNLILEVDGVYRRLIIPETTVKDSAEYVCDTADDSVTFFVNIAEPPVR
FIRPRKTASRVEKVVGNTLVLDCEVSRSNAEVTWKKDGEEVEDSRNVTILEDGAIRQLTI
HSLTVEDAGQYVCDAKDDVMDFHVKVQELPVKILGKPDAKTEKQFLVSDDIILVCELSRA
NASVSWYKDNQLIDDTERYCSEEQGVFRSLVVLNAGLEDSGEYTCDAVDDNMIFYITVKE
PPVKIIGNSGHPEHHMLVAGDDLILECEVSRPNATVQWLWNGEILKPDTRVKIDSYDVVR
KLVLSGLQPSDSGKYICDATDDKLITIVEVQAPRVVEFIAELRSITVCEGEDAVYKCVVS
PENTRLVWYLNGKQVALNERTVISSNGLCHMLCIHNCMVSDSGKVTADAEGLVSEAELQV
QEQQVLFTKKMTPVIAEEYSEATLEVEVSRESEEVQWMRQGVLIHPGSKYTLKHKGRKHS
LTIHKLTMSDRGTYSCETLHDRTQAQLTVEPRKITIKRELTDIKTTERETASFEVELSHP
NVPGTWTRNGIQLKPTHHFRMTAKGQVHSLTVSNLSVEDTGTFTFCVENLKTSARLVVKE
PPVTVFRKLENQKFPEGAIVSIECELSRHNINVKWIKDGVELKAGKDLRIYAMGRKRFLQ
IMKCQVSDSGMYTCDAGDATTSCTVEVYERELLIVQGLEDLHIQEDQNAVFVCEISVEDV
PGEWYKNGEKIQPTSTIKVRQEGTKHFLLMCNVRPEDSGEIKFVARHIESVTCLEVEEVP
VNIVKPLQDKTALEKSRVILDCTVSNPRCSIRWYKGSNVILPSERFEICSEGCYRKLIIQ
QVVLEDEGMYSVQVGEYSCSAKLTVEAQSLLMVRELKDVEVKAPNEACFECEVSVPVIKS
PVWSLNGEPLQQSPRIRLEKMGTVHRLTLRQTSPDMSGAVEFTSGKAKSTAQLRVLSDP
NT seq
5940 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgtttggtggtgcaccacgtttcttggcctacccaagacctgtgatggtacaa
agtgggactgatgcagtcttaaagtgtcaaattggtggtgatccacggcctgcagttatt
tgggagcgaaacaatgaaaagattgacccacaagaacgatacagagttttcgaggatgga
aatgtttacaatctcattatttcagctgtgaccacagaggatagtggtcagtacatatgc
aaagcaaaaaacagtataggggaaacatacgcagctgccacactgaaggtggaaggtgag
gctcaagagatggagttacgagaggaaaataagccacgattcctcatcaagcctctctcc
actcgtgtcggccgcggggaagatgctgtcttctcttgtaagctttggggaaacccacga
ccagaggttgtctgggaaaaggatggcagaaaactcaatgaaatatttgaaagcacacat
ttcagtgtgggctaccaggacggtggatggttccagcttaagatctttaagactcgtgca
ccagatggtggtgtatatacatgcaaggctcggaatgagtttggcgaggcactggcagga
gctgtgttgcttgttgatgctggcccaggacacgaggatgatggaaatcgtaatggctac
acaaatggccactggaaaggtcaccagggaaaacagaggagtggtaggcaagtgtcaaat
cggctaaaagatgaccctctgaccaagtcaacaaaagtaaaaatgtttgcagtgacagag
ggcaaacatgccaaattccgctgctttgtgactggaaaacccaaaccagaaatcatttgg
aggaaagatggcaggctgatactgtctggaagacgctatttgttatatgaggacagggaa
ggatacttcactctcaaagttctgtactgtaagcagaaggataacggagtttatgtttgt
gctgcttcaaatactgcagggcaaactctcagtgccgtacacctcactgtaaaggagcca
cctgtgcggttcaagcagcctcttattgatctagaggtttgggaacgagacttggctgtt
ctcgagtgtgaagttccagaggactcggttcccatcacgtggtatctggaggatagaaga
ctgcagccgggggccaaatatggaatggaggagtggggaacaaaacggcggctaaccatc
cgtgacattggagtcgacgacgatgggatatacctctgcgagatgcccgatggtgggaga
agtattgcagaggtagctgtgaaaggtacaattttgcgaaagcttccaagaaaagtggat
gtcttggaaggcgaaaatgctgccttttgtgttgaggtggaaaaagaagagatggatata
cattggtacaaagatggtgtagagctgcgtgaaactcataagaccatccttaagtccttt
ggtcgaactcacatcctggttttcgtcaatacaatgccccaagactccggccttgtgata
ttccttgtaggcagatccaagacttcctctcagctaagagtgaaagccgccagacattgt
cctcccagttgtccagtgggtgtccagatcaacacagagcgtgccaatgcagctcttctg
tcgtgggttcctgctcaggactcacggaagaaccctccatctggatatgtgcttgagcga
caggaagtgggcactggctcacaggagtggctacagtgtttgaccactgactcagcaacc
tctgtggagatccttggtgacagcgtaccatgtgaagctgattatcgatttcgtatttgc
agcgtaaacaaatacggcaagagcaacaatgttgagttccctagggctgttcacttggtt
ccagtggccagaatacaagctcccttacaggatgcattggtgcctgagggacaggatggc
ctcttctctatcgagctctctgcttctgttatcggcacatggttcttaaacggcactcag
cttcaggaggatgaacgttattccatgcgacggacccgaacacaccaatctcttcgtatt
agaggagtgcgtgatacagacaatggagctgagattacctttattgcctatggcataagg
gattctgcagcattgtacatacaagctcctcttgtcaagttttcaccactgtcagaaatg
gatcgaaacaaatttgtagagattgggaaccccattgtgctctactgtgagctgtcagac
cctgcagcaccagtacactggtacaagaatggggtggagttacaaacagttgagggtctt
catatccaatcagagggcaccatgagaagaattgtcatccaatcagcagaattctcacat
tcaggagtttattgctgcgatgccattgatgacgtcatcaggtttaatgtggaagtagag
gcaccaccagtcacatttgctgatatcccagaggaagaccttttcaagagtgttgtggaa
caagaagagcttgctctgtcatgcgaagtatcaagggctgatagtgttgtccagtggtat
aaagatggaattgaagtgcaactgagcgacaatattacaattcaagcagagggcacccaa
agaaatctgacaatccattcagctcaactgtcagactcaggcacatatacatgccgtgca
ggagacaacattttaatgttcaaagttaacatacgagaacctccggtgacgataatctac
cccaaggaggatgtccacctcgaccgtcacgtccctgaggaaatcattctgagttgtgaa
ttgtctcgtccaaacggtgttgtgagctggttcaaagacggccaaaagctgcaggagagt
gagaacattaagctcaaggttgaaggcccttatcggcgactgaagattatttccagtgga
gtggaagattctggagaatacgtctgtgatacagctgatgattcaatattctttaacctt
agtattacagagcctccggtgcggattgtatccccgagtcagtcacaaatggaactgtgt
cagcaaacgtccgagaggatggtactgagctgtgagatctcacgacctaatgcaatggta
cgctggtatcgagatggacttgaagtggaggagaatgacaaccttattctagaggtggac
ggtgtctacagaagacttattatacctgaaactacagtcaaagattctgcagaatacgtc
tgtgatacagcagatgactcagtgacgttcttcgtcaacatagcagagcctcctgttcgc
tttatacgtccacggaagaccgcaagcagagtggaaaaagtggttgggaatactctggtt
ttagactgtgaggtttccagatcaaatgctgaggtcacatggaagaaggatggagaagag
gtggaggactccagaaatgtcaccatccttgaagatggtgccatacgtcagttgaccatt
cattcactgacagttgaagatgctgggcaatatgtctgtgatgcaaaggatgatgtgatg
gacttccatgtaaaagtacaagagttgcctgtgaaaattctcggaaaacctgatgcaaaa
acagagaaacagttcttagtatcggatgacataattctcgtgtgcgaactatcaagagcc
aatgcctcagtcagttggtacaaagataaccagctaatcgacgacactgagcgatactgt
agtgaggagcaaggtgtttttcggtcactggttgtcctaaatgctgggctcgaggattcg
ggagaatacacctgtgacgcagtggacgataacatgatcttctatatcactgtcaaagag
cctccagtaaagatcattggaaattcaggccacccagagcatcatatgctggtagcaggg
gatgaccttattttggagtgtgaggtgtctcggccaaacgccactgttcagtggttatgg
aatggcgagatactgaaaccagacactcgagtaaaaattgacagctatgacgttgtgagg
aagcttgttctctctggacttcagccctcagactctggaaaatacatttgcgatgccacc
gatgataaactgataacgattgttgaggtccaggctccccgtgttgttgagttcatagcg
gagcttcgtagcatcacagtctgtgaaggagaggatgcagtatataagtgtgtggtttcc
ccagagaacactcgcttggtctggtacttaaatggcaaacaagttgctctgaatgagcgc
actgtcatttcaagcaatggactatgccacatgctctgcatccacaactgcatggtttca
gatagcggcaaagtgacagctgatgccgagggactggtatcagaggcagaactccaggtt
caagaacaacaggtgttgttcaccaagaaaatgacaccagttatagctgaagagtacagt
gaggcaactctagaggtggaggtgagtcgggaatcggaagaggtacagtggatgaggcaa
ggggtgctgatccaccctgggtccaagtatactctgaaacacaagggccgaaaacacagt
ctcaccatccacaaactcaccatgtctgaccgtggcacctacagctgtgaaaccctccat
gaccgcacgcaagcccagctcacggtggaacctcgaaaaatcacaatcaagagggagctg
actgacataaaaaccacagagagagaaacagcctcttttgaggtggaactatcccatccc
aacgtaccaggcacctggacgaggaacggcattcagctcaagccgacacaccacttccgc
atgactgccaaaggacaagtccacagcctcactgtctcgaatctgtcagtagaagacact
ggcacctttacgttctgtgtggagaatttgaaaacatctgcaaggcttgttgtcaaggag
cccccagtgacagttttcagaaaactggagaaccagaaattccctgaaggtgcaatagtg
tctattgagtgtgagctgtcaagacacaatatcaatgtgaaatggatcaaggatggggtt
gagttgaaggcgggcaaggacttgcgcatttatgcgatgggacggaagcgtttccttcag
atcatgaaatgtcaagtcagtgattctggcatgtacacctgtgatgctggagatgcgact
acgtcctgcactgtggaggtctatgagcgtgaactgctgatcgtgcagggcctcgaggat
ctgcatatccaggaagatcagaatgcagtgtttgtttgtgagatctcagtagaggacgtg
cccggcgaatggtacaaaaacggagagaagatacaacccaccagtaccatcaaggtccgc
caggaagggacaaaacattttcttctgatgtgcaatgtgcgcccggaggactctggagaa
atcaagtttgtcgccagacatatcgaatctgtcacttgcctggaggtggaagaggttcct
gtcaacattgtgaaacctctgcaggataaaaccgccctcgagaagagccgtgtgatctta
gactgcacggtgtccaaccccagatgtagtatccgctggtacaaaggcagtaatgtcatc
ctaccctcagagcgctttgagatctgcagtgagggctgttatcggaaactaatcatccag
caggtggtgctagaggatgagggcatgtacagcgtgcaggttggagagtattcatgctct
gctaaactgacagtggaggcccagtctttgttgatggtcagagaactgaaagatgtggag
gtcaaagcccccaacgaagcctgttttgaatgtgaggtgtcagtcccagtcatcaaatcc
cccgtgtggagcctgaatggggagcccttgcagcaaagccctcgtatacgtctggagaag
atgggaacagtccaccggctgaccctgagacaaacctccccagacatgagtggagcagtg
gagttcacttctggaaaagccaagagcacagctcagcttcgggtgcttagtgatccatga
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integrated database retrieval system