Scomber japonicus (chub mackerel): 128368417
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Entry
128368417 CDS
T09718
Name
(RefSeq) amyloid-beta A4 protein-like isoform X1
KO
K04520
amyloid beta A4 protein
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128368417
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sjo01002
]
128368417
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sjo00535
]
128368417
00536 Glycosaminoglycan binding proteins [BR:
sjo00536
]
128368417
Peptidases and inhibitors [BR:
sjo01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
128368417
Proteoglycans [BR:
sjo00535
]
Cell surface proteoglycans
Others
128368417
Glycosaminoglycan binding proteins [BR:
sjo00536
]
Heparan sulfate / Heparin
Others
128368417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
128368417
NCBI-ProteinID:
XP_053185193
LinkDB
All DBs
Position
11:complement(20541663..20553338)
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AA seq
755 aa
AA seq
DB search
MGEHTAFLLLLVATLTLSSEVPADDSVGLLTEPQVAMVCGKLNMHINVQSGKWESDPSGT
KSCIGTKEGILQYCQEVYPELQITNVVEANQPVSIQNWCKKGRKLCRSHTHIVVPYRCLV
GEFVSDALLVPDKCKFLHQERMDQCESHLHWHTVAKESCGDRSMNLHDYGMLLPCGIDRF
RGVEFVCCPTEAEQESDSVELEGEESDVWWGGVETEYTDNSMLREADTEPATTEDDEDED
EEAGTYERDENGDGENDEEDEEDEEDDVINERDSDERTANIAMTTTTTTTTESVEEVVRA
VCWARAESGPCHDMLERWYFVPEKGSCTPFLFGGCGGNRNNFDSEEYCLAVCSSSLPTMA
PSPPDAVDRYLESPGDDNEHTDFQKAKESLEAKHREKMSQVMREWEEAERQAKNLPRADK
KAVIQHFQEKVEALEQEAAGERQQLVETHMARVEALLNSRRRLALENYLSALQANPPRQT
RQVLSLLKRYIRAEQKDRQHTLKHYEHVRTVDPKKAAQIRPQVLTHLRVIDERMNQSLGL
LYKVPSVAHEIHNQVAVIVQRVQAELSQQVSSLQSDGRVDGRVSYGNDALMPDQAYSSAP
MEPGLDGLGFIHPESFNQPNTENHVEPVDARPVPDRGLPTRPVSALKPEEMPEVRMDTEE
RQSAGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLRKKQYTSIHHGV
IEVDAAVTPEERHLAKMQQNGYENPTYKFFEQMQN
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgggagaacacacggcgtttctgctgttactggtggcgaccttgacgctctcatccgag
gttcctgctgatgactctgtgggtttgcttactgagccccaggtggccatggtctgtggg
aagcttaatatgcacatcaacgtgcagagtggcaaatgggagtctgacccctctggcacc
aagagttgcataggcaccaaggagggcatcctgcaatactgccaagaggtgtatccagag
ttgcagattacaaatgttgtggaggccaatcagcctgtcagcatccagaactggtgcaag
aaaggccgcaagctatgccgcagtcacacacacattgtggtgccatatcgctgcctggtt
ggggagtttgtgagtgatgccctgctcgttcctgacaagtgcaagttcctgcaccaggag
cgtatggaccagtgtgagagccacctgcactggcacactgtagccaaagagtcctgcgga
gatcgctccatgaatctccatgactatgggatgctgttgccatgcggtattgaccgtttc
cgcggggtggaatttgtctgctgtccgacggaggcggaacaagagtcggatagcgtggag
ctagaaggagaggagtcagacgtctggtggggcggagttgagactgaatacactgataac
agcatgttgcgtgaggccgatacagagccagccaccaccgaggatgatgaagacgaagac
gaagaggcagggacttatgaaagggatgagaacggagatggtgaaaatgacgaggaggat
gaggaagacgaggaggatgacgtgatcaacgaacgggacagtgatgagcgcactgctaac
atcgctatgacaactaccaccaccaccaccacagagtcagttgaggaagtcgttcgagcg
gtttgttgggcacgtgctgagtcaggcccgtgtcatgacatgctggagcgctggtacttc
gtgcctgaaaagggcagctgtactcccttcttgtttgggggctgtgggggcaacaggaat
aactttgactcggaggagtactgcctagctgtctgcagcagctcgttgcccaccatggct
cccagtcctccagatgcagtggatcggtaccttgaatctcctggggatgacaatgagcac
actgacttccagaaggcaaaggaaagcctggaggcgaaacaccgtgaaaagatgtcccag
gtgatgagggagtgggaggaggctgagagacaggccaagaaccttcctcgtgctgacaag
aaagctgtcatccagcacttccaggagaaggtggaggctctggagcaggaggcagcagga
gagaggcagcagctggtggagacacacatggcccgggtggaagctctgctcaacagccgc
aggcgcttggctctggaaaattacctcagtgccctgcaggctaaccctccacggcagact
cgtcaggtgttgagcctgctgaagaggtacatccgtgcagaacagaaggaccggcagcac
acgctgaaacattatgagcacgtccgcacagttgaccccaagaaggccgcgcagatccga
cctcaggttctgacgcacctacgtgtgattgatgagaggatgaatcagtcattgggtctg
ctctacaaagtgcccagtgtggctcatgagatccacaaccaagtcgcggtcatagtgcaa
agagttcaggccgaactgtctcagcaagtctcctccctgcagagcgatgggcgggtggac
ggcagggtgagttacggtaatgacgctctgatgcctgatcaggcctacagctctgctccc
atggagcctggccttgacggactcggcttcatccatcctgagagcttcaatcagcctaac
acagagaatcacgttgaacctgttgatgctcgccctgttccagatcgagggcttcccaca
cgacctgtgtctgccctgaagccagaagagatgccagaagtgcggatggacactgaagag
aggcaaagtgctggttacgaagttcaccatcagaaactggtttttttcgccgaggatgtg
gggtccaataaaggtgccattattgggcttatggttggaggggttgtcatagccaccgtc
attgtcatcaccttggtgatgttgaggaagaaacaatatacttctattcatcatggcgta
attgaggtggatgcagcggtgaccccagaggagcgtcatctggctaagatgcagcagaac
ggttatgagaaccctacctacaaattcttcgagcagatgcagaactaa
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