Scomber japonicus (chub mackerel): 128368436
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Entry
128368436 CDS
T09718
Symbol
edar
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
128368436 (edar)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
sjo04050
]
128368436 (edar)
Cytokine receptors [BR:
sjo04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
128368436 (edar)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Death_EDAR
TNFR_c6
DUF2852
Motif
Other DBs
NCBI-GeneID:
128368436
NCBI-ProteinID:
XP_053185229
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Position
11:complement(13368441..13393395)
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AA seq
518 aa
AA seq
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MSERRVQTKSIFLSSLLVCCMFASAEYSSCGEYEFLNQTSNSCQACPQCQPGQEPHMTCG
YGVKDEDFACVPCPQGKYSKGKYEICRRHKDCDALYKATVRVAGTPDSDAECGPCLPGYY
MLENRPRNLYGMVCHSCQNAPPNTKECMPTSGQIEKPQIDPGSTTVFPNPHKDSTGQGHL
ATALIIAMSTIFIMAIAIVLIIMFYILKAKPSGQACCSGQVTKAVEAQSNKQEDKKDVPD
NVVIYSEKDEFDKLKAPPQKTVKSENDASSENEQLLSRSMDSDEEAALEKQGSAETTNPN
PNLCLVNLGNKPDLCLLSLGLLDRERACNGTPNITASPTNNVQSPNHIGNVNHIASSVTA
INNNNKTPGMLQSRRKKILDLYARACNVTEGLSPTELPFDCLEKASRMLSSSYSSEAAVV
KTWRHLAESFGLKRDEIGGMSDGLQLFERVSTAGYSIPDLLTRLVQIERLDAVESLCSDV
LGSNEVAAAGGRQGISSFHSQLVCTSPCPSPSQRCASV
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaggagagttcagacaaagtccatctttctgtcctcgttattggtgtgttgt
atgtttgcgagtgcggagtattccagctgtggagagtacgagttcttaaaccagaccagt
aacagctgccaggcctgccctcagtgccaaccaggacaagagccacacatgacctgtggc
tacggtgtgaaggatgaggactttgcctgtgtgccgtgcccgcaggggaagtactccaaa
ggcaaatatgagatctgcagacgacataaagactgcgatgccctctacaaagccacagtg
cgtgtagcgggaactccagacagcgacgcagagtgtggaccttgtttaccagggtactac
atgctggagaacagacccaggaacctctatgggatggtttgccactcctgtcaaaatgca
ccacccaacaccaaagaatgcatgccaaccagcgggcaaatagaaaaacctcagattgat
cccggcagcacaactgtgtttcctaatccacataaagattccacaggacagggtcaccta
gcaacagctctcattatcgccatgtcaaccatcttcattatggccatcgccatcgtcctc
atcattatgttttatatcctgaaggccaaaccaagtggccaggcatgttgctctggacag
gtgacgaaggcagttgaggctcaatccaacaaacaggaagacaagaaagatgtccctgac
aacgttgtgatctattcagagaaagatgagtttgacaaactgaaagctccccctcagaag
acggtgaaaagtgaaaatgacgcatcgtcagagaacgagcagcttctgagccgtagcatg
gacagcgatgaggaggcagcgttggagaagcaaggatcagccgaaaccactaaccccaac
cccaacctgtgcctcgtcaatctgggcaacaagcctgacctctgcctgctctctctgggc
ctcttggaccgcgaacgtgcctgcaacgggacccccaacattactgccagcccgaccaat
aatgtccagagccccaaccacattggcaatgtcaaccacattgccagcagtgtgaccgca
atcaacaacaacaataaaaccccagggatgctacagagtcgaaggaaaaagatcctggat
ctgtatgccagagcgtgcaatgtgacagagggcctgagccccacagagcttcccttcgac
tgcctggagaaggccagccgcatgctgagctcctcctacagcagcgaggcggccgtggtg
aagacgtggagacacctggccgagagcttcggcctgaaacgcgacgagatcggtggcatg
agcgacggcctgcagctctttgagagggtgagcacggcgggctacagcatccccgacctc
ctgacccgcctggtacagatcgagaggctggatgccgtcgagtcgctctgctcagacgtg
ctgggcagcaatgaggtggcggcagcaggcggacggcagggaatcagcagttttcacagc
cagttggtttgcacgtccccttgcccgtccccctcccaacgctgtgccagtgtctaa
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