Scomber japonicus (chub mackerel): 128368438
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Entry
128368438 CDS
T09718
Symbol
htr1fa
Name
(RefSeq) 5-hydroxytryptamine receptor 1F
KO
K04153
5-hydroxytryptamine receptor 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04080
Neuroactive ligand-receptor interaction
sjo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128368438 (htr1fa)
04082 Neuroactive ligand signaling
128368438 (htr1fa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
sjo04030
]
128368438 (htr1fa)
G protein-coupled receptors [BR:
sjo04030
]
Rhodopsin family
Biogenic amine
Serotonin
128368438 (htr1fa)
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Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srv
7tm_4
Motif
Other DBs
NCBI-GeneID:
128368438
NCBI-ProteinID:
XP_053185230
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Position
11:complement(13205230..13206438)
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AA seq
402 aa
AA seq
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MDFPNCTEGVYATSSGGYDSLETTKPPSSKILLTLTLSVVAILTTFFNCLVITAIAVTRK
LHHPANYLICSLAVTDLLVAVLVMPFSIMYIQKESWVMGKVVCTIWLSVDVTCCTCSILH
LAAIAIDRYRAITDAVEYSRKRTGARAGAMVAVVWLLSIFISLPPLLWRHYSGDAEQEDQ
CIIIHHHMAFTLYSTFGAFYIPLLLILILYYKIYRAAQTLYMRREASRASRHSCMTNGSM
IPSSYPAGDDDDDRGPQSPVPISPPEKSFSEASTEEPPRERVRVSKKTFQCKSRRHESRS
ESRSESRRSQFYQGPRISGSRERKAASTLGLIIGAFVICWLPFFVKEVIVNTCSSCSTSM
EMADFLTWLGYLNSLINPLIYTIFNEDFKKAFQRLVRCSHYL
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggattttcccaattgcactgaaggggtttatgccacaagcagcggtggttatgactca
ctggaaaccaccaaacccccttccagtaagatcctgcttacgctgaccctgtctgtagtg
gctatcctgactacatttttcaactgcctggtgatcacagctatcgcggtcacccgcaag
ttacatcacccagccaactacctcatctgctcattagcagtgaccgacctgctggtggct
gtgctggtcatgccctttagtatcatgtacatccaaaaagagagctgggtcatgggcaag
gtggtgtgcaccatctggttaagtgtggatgtcacttgttgcacatgctccatcctccat
cttgctgcaattgccattgaccgttacagggccattactgatgctgtggagtactctcgg
aaacgcacaggggccagggcaggggcgatggtggcggtggtgtggctcttgtccatcttc
atctcgcttcctccactgctgtggcggcactacagtggggatgcagagcaggaagaccag
tgcatcattatccaccatcacatggcgttcactctgtattccacattcggagctttttac
atccccttgctgctcatccttatcctctactataaaatctacagggctgctcagacccta
tacatgcgcagggaggcaagccgggctagccgtcactcgtgtatgaccaatgggagcatg
atcccatcatcctaccctgctggagatgatgacgatgatcgggggcctcaaagtccggtg
cccataagcccaccagaaaagtctttctctgaagcctcaactgaggaacctccacgtgaa
cgggtgcgtgtctcaaaaaagactttccagtgcaagtctcgccggcacgagtcacgtagt
gagtcacgtagtgagtcgcgtcgcagccagttttaccaaggaccacggatctcaggctca
agggagcgcaaagcggcgtcaacattggggttgataataggagcatttgtcatctgttgg
ttgccgttttttgtcaaagaggtgatcgtcaacacttgcagttcttgcagtacttcgatg
gagatggctgactttctgacatggttggggtacctcaactcgctgattaaccctcttatc
tacaccatatttaatgaagacttcaaaaaagctttccaaagacttgttaggtgcagtcat
tacctctga
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