KEGG   Scomber japonicus (chub mackerel): 128368485
Entry
128368485         CDS       T09718                                 
Name
(RefSeq) vimentin A2-like
  KO
K07606  vimentin
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    128368485
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sjo03019]
    128368485
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:sjo04812]
    128368485
   04147 Exosome [BR:sjo04147]
    128368485
Messenger RNA biogenesis [BR:sjo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     128368485
Cytoskeleton proteins [BR:sjo04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     128368485
Exosome [BR:sjo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128368485
  Exosomal proteins of other cancer cells
   128368485
SSDB
Motif
Pfam: Filament Filament_head TolA_bind_tri DUF7491 DUF1664 DUF948 DUF7801
Other DBs
NCBI-GeneID: 128368485
NCBI-ProteinID: XP_053185279
LinkDB
Position
12:22686243..22691841
AA seq 455 aa
MSYRSAPHSSYKKMFGGERNAVRSSYSSRQYSIPVRSSRVSFGLSSAPTIYASKTQRLRS
SSAMPRLASENLDFSLSDAINSEFITNRTNEKAQMQSLNDRFASYIDKVRFLEQQNKILL
AELEQLRGKGTSRVGDLYEDEMRELRRQVDQLTNEKARVEVHRDNLADDIDRLREKLQDE
LSQREEAEANMQSFRQDVDNAALARLDLERKVESLQDEINFLKKLHDEEMLELQSQVQQQ
QHVQVDMEMAKPDLTAALRDVRLQYENLASKNIQESEEWYKSKFADLTEAAARNNDALRV
AKQEANDYRRQVQALTCEVDALKGTNESLERQMREIEENFSLETGGYQDTVGRLEEDIHN
MKDEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISTPLPNFSSLNLRETMIDSK
PHFETTTTKKVLIKTIETRDGQVINESTQNHDDME
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgtcttacaggtcagctccacattcttcatataaaaagatgtttggaggggagagaaac
gcggttaggagcagctactccagccgccaatactccatcccggtgcgctcatcccgggta
tcgttcgggctctcctccgccccgaccatctacgcatcgaagacccagaggctccggagc
agctcggccatgccccggctggcctccgagaacttggacttctccttgtccgacgccata
aacagtgagttcataacgaaccgcaccaacgagaaagcgcagatgcagtctctcaatgat
cgcttcgccagctacatagataaagtccgcttcctggagcagcagaacaagatcttgctg
gcagagctggagcagctgcggggcaaaggcacgtcccgcgtcggagatctgtacgaggac
gagatgcgggagctgaggcgccaggtggaccagctcaccaacgagaaggcccgggtagaa
gttcaccgggacaacctggcagacgacatcgacaggctgagagagaagttgcaggatgag
ctatcccagcgagaggaggctgaggcaaacatgcagagcttcagacaggatgtggacaat
gctgccctcgccagactggacctggagcggaaggtggagtccctgcaggatgaaataaac
ttcctcaagaagctgcatgatgaggaaatgttggaacttcagagccaggtccagcagcag
cagcacgtacaggtggacatggaaatggctaaacctgatctgacagcggctttaagggat
gtgcgtctgcagtatgagaacctggcctccaaaaatatccaggagtctgaggaatggtac
aaatccaagtttgctgacctcaccgaagctgcagcccggaataatgatgctttgagggtg
gctaagcaggaggctaatgactatagacgccaagttcaggcactgacctgtgaggtggat
gctctcaaaggaactaatgagtccttggagcgccagatgagagagatagaggagaacttc
tccctggagacgggcggttaccaggacaccgtcggccgtctggaagaggacattcacaac
atgaaggatgagatggcccgtcacctccgggagtaccaagacctcctaaatgtcaagatg
gccctagacattgagattgccacctacaggaagctgctggaaggagaggagagcagaatc
tccaccccactgccaaacttctcatctctaaacctgagagaaacgatgattgactccaaa
cctcactttgaaaccacaacaaccaagaaggtcctcatcaagaccattgagactagggat
ggtcaggtgatcaacgagtcaacccagaaccacgacgacatggagtga

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