Scomber japonicus (chub mackerel): 128368510
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Entry
128368510 CDS
T09718
Symbol
pax3a
Name
(RefSeq) paired box protein Pax-3a
KO
K09381
paired box protein 3/7
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128368510 (pax3a)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
128368510 (pax3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax7
Homeodomain
Homeobox_KN
HTH_23
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
128368510
NCBI-ProteinID:
XP_053185319
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Position
12:16304002..16321649
Genome browser
AA seq
487 aa
AA seq
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MTALAGGLPRMMRPSPHQNYPRGGYSLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
EMAHHGVRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQSASPEVDKKIEE
YKRENPGMFSWEIRDKLLKDGICDRNNVPSVSAISRVMRSKFGGIGEDDEDDDEGVKREM
EENEPRTKHSIDGILGDRSSHSDEGSDVDSEPGLPLKRKQRRSRTTFTAEQLEELERAFE
RTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPSAM
SGLQPYQLSDSPYPPTSIAQASEQPSTVHRPQPLPPTSVHQSGLSSSAGSQDGGSAYCLS
SGRHGFSGYSDSFVAPTGHANTVNPAISNSLSPQVMGLLNPGGVPHQSQSDFALSPLTGG
LEPNGGMAASCHGSQRLEALPGLTSMPTLPSTQSYCPPSYTSPAYAMDHHPSYQYGQYSQ
SKVPFII
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgcttgcaggaggtttaccgagaatgatgagacccagccctcaccagaactac
ccgcggggaggatactctctcgaggtctccactccgttaggacagggtcgggtcaaccag
ctcggcggtgtcttcataaacggcagacctctacccaaccatatccgccataaaatcgtg
gagatggcccatcacggtgtccggccgtgtgtcatctctcgtcagctccgggtgtcccac
ggctgcgtctccaaaatcctctgccggtaccaggagactggctccatcaggccgggggcc
atcggaggcagcaagccaaagcaaagcgcgtctccagaggtggacaagaagatcgaagag
tacaagagagaaaacccgggcatgttcagctgggaaatcagggacaaattgctgaaagat
gggatctgcgacaggaacaacgtcccctcggtgagcgccattagtcgcgtcatgcggtca
aaattcggcggaattggtgaggatgacgaagacgacgatgaaggggtgaagagggagatg
gaggaaaacgaaccacggacaaaacacagcatcgacggcattctgggagacagatccagt
cactcagatgagggctccgatgtggactcagagccaggcctacctctgaagaggaagcaa
cggcgcagtcggaccaccttcacagcagagcagctggaagagctggagagggccttcgaa
cgcacacactaccctgacatctacacacgagaagaactggctcagagagccaaactcacg
gaggctcgagttcaggtgtggttcagcaacagaagagctcgatggaggaagcaagcagga
gccaatcaactgatggcttttaaccacctcatccctggcggttttccaccatcagctatg
tcaggcctgcagccctatcaactgtcagacagcccctaccctcctacttccatagctcaa
gcatcagagcagcccagtacagtccaccgaccgcaacctctgcctcccacctccgtgcac
cagagtgggctcagctcatcggcaggctcccaggatggaggctctgcatactgcctgtcc
tctggacgtcatggtttttcaggatactcggacagttttgtggccccgacaggacacgcc
aacactgtcaaccccgccatcagcaacagcctctcaccacaggtcatgggccttttgaac
ccaggtggagtaccacatcagtctcagagtgactttgccctctccccactgactggaggc
ctggagcctaatggtggcatggctgctagctgtcatggctcccagcgcctggaggcttta
ccaggcctgaccagtatgcctaccctgcctagcacccagtcttactgcccaccctcctac
acctcaccagcctacgccatggaccaccatccatcctatcagtatgggcaatacagtcaa
agcaaggtgcctttcattatatga
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