KEGG   Scomber japonicus (chub mackerel): 128368547
Entry
128368547         CDS       T09718                                 
Symbol
xpa
Name
(RefSeq) DNA repair protein complementing XP-A cells
  KO
K10847  DNA-repair protein complementing XP-A cells
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    128368547 (xpa)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sjo03400]
    128368547 (xpa)
DNA repair and recombination proteins [BR:sjo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     128368547 (xpa)
SSDB
Motif
Pfam: XPA_C XPA_N PHF5
Other DBs
NCBI-GeneID: 128368547
NCBI-ProteinID: XP_053185369
LinkDB
Position
2:complement(27531974..27534425)
AA seq 275 aa
MEPSELEGVDAAGPGPEQSPKPELSAAMRAKIERNRQRALMLRQARLASRSLSAVEGATA
AKVSKTIDSGAGFFIEEEEDEEEEQRAKKVVHQPAPVIEPDYLLCDECEKPFMDSYLSNS
FDLHVCDNCRDNQEKHKLISRTEAKQHYLLKDCDLDKREPPLRFILKKNPHNSHWGDMKL
YLKLQVEKRCMEVWGSEEALEEAKETREENREVQKQKRFNKKVKELRRAVRSSMWTKDTS
AHQHQYGPEEVVDPDEDLYKKTCTTCGHELSYEKM
NT seq 828 nt   +upstreamnt  +downstreamnt
atggagccgtcagagttagagggagtggatgctgccggtcccggtccagaacagagtccc
aaacccgagctttctgcagcgatgcgggctaaaatcgagaggaaccggcagcgggcgttg
atgctccgacaagcccgactggcgagccgctctttgtcagccgtggaaggcgcgaccgcg
gctaaagtctccaagaccattgactctggggccgggtttttcatcgaggaggaggaggat
gaagaagaagagcagagggcgaagaaagtggtgcatcagccagctccagtgatcgagcca
gactacctcctctgtgatgagtgtgaaaaacccttcatggactcctacctcagcaacagc
tttgatctgcatgtgtgtgacaactgcagagacaaccaggagaagcacaagctgatctcc
cgaaccgaagccaaacagcactacctgctgaaggactgtgacctggacaagagagagcct
ccgctcaggtttatactgaagaaaaaccctcacaactcacactggggggacatgaagctc
tacctcaaactacaggtggagaagaggtgtatggaggtgtgggggtcagaggaggctctg
gaggaggccaaagagacgagagaagagaacagagaggtccagaaacaaaagcgcttcaac
aagaaagtcaaagagctacgcagggcggtgaggagcagtatgtggaccaaagacaccagc
gctcaccaacatcagtacggaccagaggaggtggtggatccagatgaggacctctacaag
aaaacctgcaccacctgtggacatgaactctcctacgagaagatgtag

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