Scomber japonicus (chub mackerel): 128368596
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Entry
128368596 CDS
T09718
Symbol
acsl3b
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 3b
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00061
Fatty acid biosynthesis
sjo00071
Fatty acid degradation
sjo01100
Metabolic pathways
sjo01212
Fatty acid metabolism
sjo03320
PPAR signaling pathway
sjo04146
Peroxisome
sjo04216
Ferroptosis
sjo04920
Adipocytokine signaling pathway
Module
sjo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
128368596 (acsl3b)
00071 Fatty acid degradation
128368596 (acsl3b)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
128368596 (acsl3b)
09143 Cell growth and death
04216 Ferroptosis
128368596 (acsl3b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
128368596 (acsl3b)
03320 PPAR signaling pathway
128368596 (acsl3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sjo01004
]
128368596 (acsl3b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128368596 (acsl3b)
Enzymes [BR:
sjo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
128368596 (acsl3b)
Lipid biosynthesis proteins [BR:
sjo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
128368596 (acsl3b)
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of breast milk
128368596 (acsl3b)
Exosomal proteins of breast cancer cells
128368596 (acsl3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
128368596
NCBI-ProteinID:
XP_053185422
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All DBs
Position
12:complement(16281947..16291023)
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AA seq
711 aa
AA seq
DB search
MKLKEDMNPLLLQVFRSVVWVYSVITFIPWYFFSGAGSNLERARRIKARSVSRHPAGPYR
AINSQEKLVAWLHPGVDTLDKMFEYAARSFPQRDCLGTREVLSEEDELQPNGKVFKKVIL
GNYNWLSYEDAYQAAKCFGSGLAALGQRPQCNIAIFCETRAEWIVAAQACFMYNFPLVTL
YATLGPTAIAHGLNETEVTHIITSKDLLQSRLRAILCDVPRLQYVIVVDTKPTSWSDIPR
GITIYNMDTVRDMGSTPDNIAVDRRHPEPSDIAVIMYTSGSTGIPKGVMISHGNIIAGIT
GMAERIPNLNETDTYIGYLPLAHVLELSAELVCISHGCRIGYSSPQTLADQSTKIKKGSK
GDTSVLKPTLMAAVPEIMDRIYKNVMTKVEEMSKFQKTLFVLAYNYKMEQISKGYSTPLC
DSLVFKRVRALLGGNTRVLLSGGAPLSAATQHFMNICLCCPVGQGYGLTETCGAGTISEV
WDYSTGRVGAPLVCSEIMLKDWEEGGYYSTDKPNPRGEILIGGPNVTMGYYKNEGKNRED
FYVDQKGQRWFCTGDIGEFHPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAVLKNCPLIDN
ICAYANSDQSYVISFVVPNHRQLMALAEQRQVRGTWEEICNNSQMEKEVLRIITEAAISA
KLERFEIPKKIRLSAEPWTPETGLVTDAFKLKRKELKTHYQEDIERLYGGK
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgaaggaggatatgaaccccctgcttctgcaggtcttccgctctgtggtctgg
gtctactctgtcatcaccttcataccctggtacttcttctctggagctggctccaacttg
gagcgggctcgccggattaaggcacgctcagttagcagacacccagcagggccttacagg
gccatcaacagccaagagaagctggtggcttggctgcaccctggggtggacacgctggat
aagatgtttgaatacgctgccaggagttttccacagagagactgtctgggcaccagggaa
gtgctcagtgaggaggatgagctgcagcccaacggcaaagtcttcaagaaggtaattctg
gggaactataactggctgtcatatgaggacgcctaccaggcagcaaagtgtttcggcagc
ggtctggcagctctcggccagaggcctcagtgtaacattgccatcttctgtgagacccga
gctgagtggatcgtggcagcacaagcctgcttcatgtacaattttccactcgtcacactg
tacgccactcttggacccacggccattgcccacggcctgaacgagactgaggtcacgcac
atcatcacaagcaaggacctgctgcagagccgtctcagggccatactgtgtgatgttccg
aggctgcagtatgtcatcgtagttgacaccaagcccacaagctggtcagacattcccaga
ggcatcaccatctacaacatggacaccgtgagggatatgggatccacgcctgacaacatc
gcagtcgaccgcagacatccagagccctcggacatcgctgtcatcatgtacaccagcggc
tccacaggcatccccaagggtgtaatgatctcccatggcaacatcattgctggcatcact
ggcatggctgagcggatccctaacctcaatgaaacagacacctacattggctacctaccg
ttggctcacgttttagagctcagcgctgaactggtgtgcatctctcacggctgtcgcatc
ggatactcctcccctcagactctagccgaccagtctaccaaaataaaaaagggcagtaaa
ggggataccagtgtgctgaaacctactctcatggctgctgtaccagagatcatggatcga
atctataagaatgtgatgactaaagtggaggagatgagcaaattccagaagacactcttt
gtgctggcttacaactacaagatggagcagatctccaagggctacagcacacctctttgt
gacagtctggtgttcaaacgggtgcgcgcgctgttgggaggaaacacacgggtgctgctt
tctggcggagcgcctctctcggccgccacgcagcacttcatgaatatctgtctgtgctgc
cccgtggggcagggctacggtctgacggagacgtgtggagcaggcaccatcagtgaggtt
tgggactacagcacaggacgggttggtgctccactcgtttgctcggaaatcatgctcaag
gactgggaggagggtggttactacagcacagacaagcccaacccacggggggaaattttg
attggcggtcccaacgtaacgatgggttactacaaaaacgaaggcaagaaccgggaggat
ttttatgtggatcagaagggtcagagatggttctgcaccggggacatcggagagtttcac
cctgatggatgcctcaagatcatcgaccgtaagaaggatctggtgaagttgcaggcagga
gagtacgtctcattaggaaaagtggaggctgttttgaagaactgcccgcttattgacaac
atctgtgcctatgccaacagtgaccagtcatacgtgatcagcttcgtggtgcctaaccac
agacagctaatggcgttggcggagcagaggcaggtgaggggcacatgggaggagatctgt
aacaactcccagatggagaaagaggtcctccgcatcattactgaggctgctatctcagca
aaactggagcgatttgagatccccaagaaaattcggctgagtgctgaaccctggactcca
gagactggcttggtcactgacgcattcaaactgaaacgcaaggagctcaaaacacactac
caagaggacattgagaggctgtacggtgggaaataa
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