Scomber japonicus (chub mackerel): 128368602
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Entry
128368602 CDS
T09718
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein C-like
KO
K12884
heterogeneous nuclear ribonucleoprotein C1/C2
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128368602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128368602
Spliceosome [BR:
sjo03041
]
Common components
Common spliceosomal components
hnRNP proteins
128368602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
CDC27
PPP4R2
RRM_5
Cwf_Cwc_15
WHD_MCM8
Motif
Other DBs
NCBI-GeneID:
128368602
NCBI-ProteinID:
XP_053185428
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All DBs
Position
12:complement(27154202..27163819)
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AA seq
319 aa
AA seq
DB search
MDRSPTTSSLMAASNVTNKTDPRSLNSRVFIGNLNTLLVTKADVEAIFSKYGKIVGCSIH
KGYAFVQFANERNARSAVTGEDGRMIVGQVLDINLAGEPKPHRSKTTKRSAGDMYSSSSS
FDLDYDFQRDYYNRMYSYPSRVPAPPPPLSRAVIPSKRPRVSLSSGGSSRRTKSSFSSSS
KASQRASSSRTMKVDELQTIKRELTQIKSKVDDLLESLERMEKDHIKKSAKKTEPGEVTS
PPHTSNKKDDGIKRERDCQEMNDSDEEDDEDEEEGDLLEEEEVKSQEREDDDEEEEEEEE
GEHVEGDDDADSVNGEEDS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggatcgctcacccaccacctccagcctgatggccgccagcaacgtcaccaacaagacc
gacccccgctcccttaactcacgggtcttcatcggcaacctcaacaccctgctggtcacc
aaggcggacgtagaggccatcttctccaagtacggcaaaatcgtgggctgctccatccac
aagggctacgccttcgttcagttcgccaacgagaggaacgcccgatctgccgtcaccggc
gaggacgggcggatgattgttggacaagtacttgacatcaatcttgctggagaacccaaa
ccacaccggtcaaaaacaactaaacgctcagctggagacatgtacagcagcagttcctcg
ttcgacctcgactacgacttccagagagattattacaacagaatgtactcgtacccgtcc
cgcgtccccgctccccctccccccttgtcgcgggccgtgatcccgtccaagcgtcctcgg
gtcagcctcagcagcggaggaagcagccggcgaaccaagagcagcttctcttcttcctct
aaggccagtcagagggcttcatcgtccagaacgatgaaagtggacgagctgcagaccatc
aagcgggagttgactcagattaaaagcaaagttgacgacctgctggagagcctggagcga
atggagaaggaccacatcaagaagtcagcaaagaaaacagagccgggtgaggtgacatcg
ccaccacacacaagcaacaagaaggacgacggaataaagagggagagggattgccaggag
atgaatgactcagatgaggaggacgacgaagatgaagaggagggagatctgctggaggag
gaagaggtgaagagtcaagagcgggaggacgacgacgaagaagaggaggaagaggaggaa
ggcgagcacgtggaaggagacgacgatgctgacagtgtcaacggcgaagaggactcgtag
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