Scomber japonicus (chub mackerel): 128368726
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Entry
128368726 CDS
T09718
Symbol
znf644a
Name
(RefSeq) zinc finger protein 644a
KO
K24374
zinc finger protein 644
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128368726 (znf644a)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
128368726 (znf644a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-WIZ
zf-C2H2_4
zf-C2H2
zf-C2H2_ZNF462
zf-H2C2_5
zf-C2H2_6
Rad50_zn_hook
DDR1-2_DS-like
DUF2719
zf-C2H2_8
Motif
Other DBs
NCBI-GeneID:
128368726
NCBI-ProteinID:
XP_053185563
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All DBs
Position
12:complement(13054043..13066140)
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AA seq
1167 aa
AA seq
DB search
MAAEMSCLAGVDGDDKDADSDINALTLLQEPVRMAQESASCNNSFSKPPLKENSVLDVLS
NTDMLSPVGLGNGPTSHQATQAHELNNISTEKEEEKSITPLKTVQEIDTAGIWGFDESPE
NSLDNFSSASDLHWDPHKEFMQFLWENHGDSPGEEPKDEVLPPNSQRRRKRKMDMVVMVD
PSEDLYPDMSHKSSEDLSDAEGQVDCIPVRKVRKSRKFSNSQSSPTGKVTKYPNGTVKAI
KQILYNAPPRNSHENHLGHGLSPLKGRLTINSHSEEKPSCYPCSKCKLIFKKEHHLHCHM
KSHVDPPNISPKPFVCQECGQSFRQSSALIEHMSIHQEKRARLTEDIKDRSEKKNKDKNV
KLFCPQCPFGTNCPNTFVQHAKTHEKDKRKFRCDKCSFRTLSENDLRRHNIMQHTVITVR
KQVQNDDSEIFSCNICSYRAFSKNVFKNHLLRRHQQTFEEYKAEQCREKNAQPSKEQHVP
TSKTPVEDAEFTSKILIKNQISKRTCSPSDSNDISDLFKNSKIKRGLKSQLTESKLDKSI
NVLLSRQRHGKKTTEQKKESSNCSTSVQDSESDKDGSDQLPGTLTVKVEDSALSPNGHRL
SSRDAERDPNRSSVHKLNIDQLTVKKSPSKRKMSTPYRNTSDQDSCFILPKPLPSPKRLN
QGEMEDCDEKDIFQFKDADANTNLFDNDIKQEKQNIIYTYSRRMSMRGALQASKMLFEKI
KTEEQDKSDPEIKEECIETEVFQDTFDSHPIPLREPFTDDMSELESDRKNCPYCPAIFES
GVGLSNHVRGHLHRVGLSYNARHVVPPEQVASQDRRPRIRRKISAFRRLKKALQLESESE
TVKSIHSCPLCGDSFDNRTGQSNHIRGHLKKLGKSFATKNKSPLFLLRELMRDKKEFQKA
LQILGKRRNHFQYGASPKLSSVDRFMPTAIGIPKNNSVSSVCTDAKPQMPTFSLAEMESD
KRQLDTKLDVKNSLSGTNALIGILKKRKCQEDSKLKVSHMSRNMLTVSSNSEHSSGSRFS
SSLPNSEKGEFNRKVCVHCNATFHSGVSLSNHLRAYAKRKRNALLDGTTFDCKARRQRSR
PGSKKKTLPLPQTPEDMYRLTCRFCDLVFQGPLSVQEDWIKHLQRHIMNTSVPHTGLGMV
EVTSLPMDPTTLKTDQDSSQTAAHAAS
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgaaatgtcatgtctggcaggtgttgatggagatgacaaagatgcggattct
gatatcaatgcccttacactcctgcaagagccagtgagaatggcacaagaatcggcctct
tgcaacaattctttcagcaagcctcctctgaaagaaaacagtgttctagatgtcctgtcc
aatacagatatgttgtctccagttggcttgggaaatggacctacttcacatcaggctaca
caggcccatgaactcaacaacatctcaacagagaaagaggaggaaaagagcatcacccct
ctaaaaacagtacaggaaattgacactgcaggaatctggggttttgacgaatcacctgag
aactcattggataatttcagtagtgccagtgacctccattgggaccctcataaagagttt
atgcagtttctgtgggagaaccacggtgattcccctggtgaggaaccgaaagatgaagtt
ctgcctccaaacagccaaaggagaaggaaacggaaaatggacatggttgtcatggtggat
ccctcagaagacctttaccctgatatgagccacaagtcatctgaggatttgtctgatgca
gaaggccaagtagactgtattcctgtcagaaaagtcagaaagtcaaggaaattttccaat
tcacagtcatcaccaactggtaaagttacaaagtatcccaatggaactgtgaaggccatc
aagcaaattctttacaatgcacccccaagaaattcacacgagaaccatctaggtcatggg
ctttcaccattgaaggggaggctcacaataaattcccattcagaggagaagccatcatgt
tacccttgctcaaaatgtaagctcattttcaagaaagagcaccatttgcattgccacatg
aagtctcatgtggaccctccgaatatttcgccaaagccttttgtatgccaggaatgtgga
caatcgttcagacaaagtagtgcgctaattgagcacatgtccatacaccaggaaaagaga
gcaagactcactgaagacatcaaagacagaagtgaaaagaagaacaaggataaaaatgta
aagcttttctgtcctcagtgcccatttggaacaaactgcccaaacacgtttgttcaacat
gcgaaaacacatgagaaggacaaaagaaagtttagatgtgacaaatgtagcttcaggact
ctgagtgagaatgatcttaggagacataacattatgcagcacactgttattacggttaga
aagcaggtccagaatgatgactcagaaattttctcttgtaacatttgttcttatagagct
tttagcaaaaatgtttttaagaatcaccttctgcgtcgtcatcaacaaacttttgaggaa
tacaaagctgaacagtgtcgcgagaaaaatgcacaaccatctaaggagcaacatgtgccc
actagtaagaccccagtagaagatgctgagtttacatctaaaatcttaataaaaaatcaa
atctctaaaagaacttgttcacccagcgattccaatgacatttcagacttattcaaaaat
agcaagattaagagaggtctcaagtctcaactaacggaatcaaagcttgacaaatccatt
aatgttctcctgtcccgacaaagacatggaaagaagactacagaacagaagaaggaaagc
agtaattgcagcacatctgttcaggattctgaaagtgacaaagatggctctgatcagttg
ccaggaacattgactgtcaaagttgaagattcagctttatccccaaatggtcatagattg
tcatccagagatgctgagagagatcccaacagaagcagtgtacacaagttaaacatagat
cagttaaccgtcaaaaagtcaccgtctaaaagaaagatgtccaccccataccgcaacacc
tctgaccaagactcatgcttcatcttaccaaaacctttgccaagtcccaagagactaaac
caaggagagatggaagactgtgacgagaaagacattttccagtttaaggatgcagatgcc
aacactaacctttttgacaatgacatcaagcaagaaaaacaaaacataatttatacctat
agcagaagaatgtctatgaggggtgccctgcaagcatcaaaaatgctgtttgagaaaatt
aagactgaagagcaggataagagtgaccctgaaatcaaagaagaatgcatagaaacagaa
gtatttcaagacacttttgactcccacccaataccattgagagaacccttcacagatgat
atgtcggagttggaatcggaccgcaagaactgtccatactgtcctgccatctttgaatca
ggtgttggattgtccaatcatgtccgagggcatcttcacagggttggactgagctacaat
gcccgccacgtagtgcctcctgagcaggtggcttctcaagacaggaggccaagaattaga
cggaagatttcagcattccggagattgaaaaaagcgttacagttggagtcagaatctgag
actgtgaagagtattcactcctgtccattatgtggggactcatttgataacaggactggg
cagtccaaccacatacgtggccacctcaaaaagcttggtaaaagctttgcaacaaagaac
aaatccccattatttttactccgggagttaatgcgcgacaaaaaggaattccagaaggcg
ctccaaattttgggaaagagacggaaccatttccaatatggtgcttcaccaaagctgtcc
agtgttgatcgtttcatgccaaccgccattggaatcccaaaaaataattctgtttcaagt
gtttgcactgacgccaaaccacagatgcccacattttctttagcagaaatggaatctgac
aaaaggcaactagacactaagttggatgttaaaaattcactctcaggcacaaatgccttg
ataggaattctgaagaagaggaagtgtcaggaagactccaaactaaaagtgtctcatatg
tcaagaaacatgttaacagtttcttcaaacagcgagcacagttcaggatcaagattttca
tcttcactgccaaactccgagaaaggtgaattcaacaggaaggtgtgtgtccattgcaat
gcaactttccatagtggagtgagcttgtcaaatcatctccgggcatatgcaaaacgaaaa
aggaatgccttactagacggaaccacatttgactgtaaagcaagacggcaacgctcaaga
cctggctctaagaagaagacactgcccttaccacaaactccagaggatatgtacagactt
acatgcaggttctgtgacctcgtcttccagggtcccttgtcagtccaggaggactggatt
aaacatttacagagacacattatgaacactagtgtcccccacactgggctaggcatggta
gaggtcacttcgctgcccatggaccccactaccctcaagactgaccaagacagctctcag
acagccgcacatgctgcctcatga
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