Scomber japonicus (chub mackerel): 128368770
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Entry
128368770 CDS
T09718
Name
(RefSeq) lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A-like
KO
K03766
beta-1,3-N-acetylglucosaminyltransferase 5 [EC:
2.4.1.206
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00601
Glycosphingolipid biosynthesis - lacto and neolacto series
sjo01100
Metabolic pathways
Module
sjo_M00070
Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer
sjo_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
128368770
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sjo01003
]
128368770
Enzymes [BR:
sjo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.206 lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase
128368770
Glycosyltransferases [BR:
sjo01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
128368770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Fringe
DUF7621
Motif
Other DBs
NCBI-GeneID:
128368770
NCBI-ProteinID:
XP_053185625
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All DBs
Position
12:12584022..12588185
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AA seq
386 aa
AA seq
DB search
MFVNFRRIRKCQCVQLMTTCLVLSVVMVCWEQLDNSVVSHVKSYSYRYLVNRFAYINKSL
TIPREQARSFSNFRYLLDHPDKCAGKDVLLLLFVKTSPENIERRNAIRSTWGNETYIQNT
LGVTVKVVFALGAPPTKKDEPSSSKRAVDFQEQLIQEDHLHSDLIQQDFLDSFHNLTLKL
ILQFHWMHSHCPHARFLMTADDDIFVHMPNLVSYLQDMSSRGVTDFWIGRVHRGAPPIRS
KDSKYYVSFEMYQWMSYPDYTAGAGYVVSRDVADKIYQATLTLNASLYIDDVFMGICANA
IGVSPQEHLYFSGEGKAPYHLCIYDQMMTSHGHVDDIYDLWKAATHPQVKQRTSGFIGRL
YCTAVKMALLCKPYYFNTYPCKAAFL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgaatttccgccggatacgaaaatgccagtgtgtgcagctgatgaccacctgc
ttggtgctgtcagtggtaatggtttgctgggagcagctggacaacagcgttgtcagccat
gtcaaatcttactcataccgctacctggtcaaccgcttcgcctacatcaacaagagcctc
accatcccacgtgagcaggcccgcagtttcagcaacttccgttacctgctggaccaccca
gataagtgtgccggcaaggacgtcctcctgctcctctttgtcaaaacgtccccagagaac
attgagaggcgtaatgccatcagatctacctggggtaatgagacctacatccaaaacacc
ctgggagtaacagtgaaggtggtgttcgccttgggagcacctccaaccaaaaaggacgag
ccctcctcaagtaagagagcggttgattttcaggagcagctcatccaggaggatcatctc
cattctgacttaatccaacaagactttttagactccttccacaacttgacactgaagctg
atcctgcagttccactggatgcacagccactgcccccacgcccgcttcctcatgaccgct
gacgatgacatctttgttcacatgcccaacttggtgagctacctgcaggatatgagcagc
agaggcgtcacagacttttggattggtcgagtgcacagaggggcaccgccaatccgtagc
aaagacagtaaatactatgtgagctttgagatgtaccaatggatgtcttaccctgactac
acagctggggcggggtacgtggtctccagggatgtagcggacaaaatctaccaagccacg
ctgaccctgaacgcctctctttacatagatgatgtgttcatggggatctgtgctaacgcc
attggtgtgtcaccacaagagcacctctatttctcaggggagggcaaggcgccctaccac
ctgtgtatttatgaccagatgatgacatcacatggtcacgtggatgatatctatgatctg
tggaaggccgcgacacacccacaggtgaaacagaggacctctggattcatagggaggctg
tactgtacagctgtgaaaatggctcttctttgtaaaccctactatttcaacacctacccc
tgcaaggcagccttcttgtag
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