Scomber japonicus (chub mackerel): 128368792
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Entry
128368792 CDS
T09718
Symbol
sec22ba
Name
(RefSeq) vesicle-trafficking protein SEC22b-A
KO
K08517
vesicle transport protein SEC22
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04130
SNARE interactions in vesicular transport
sjo04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
128368792 (sec22ba)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128368792 (sec22ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128368792 (sec22ba)
Membrane trafficking [BR:
sjo04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
128368792 (sec22ba)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
IMD
Sec20
Motif
Other DBs
NCBI-GeneID:
128368792
NCBI-ProteinID:
XP_053185649
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All DBs
Position
12:12733967..12737114
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AA seq
215 aa
AA seq
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MIVLTIIARVADGMPLAASIQDDDQSGRDLQQYQSQAKQLCRKLNAQSPDRCTLEAGVMN
FHYLIAQGVCYLSLCEASFPKKMAFAYLEDLHREFYDQYGRRVQTVTRPYSFIEFDTYIQ
KTKKSYIDSRGRRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDTKASNLSSLSKKY
RSDAKYLNTRSTYAKVAAVAVFFVTLIIYVRFWWL
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgattgtcctgacgataatcgctcgtgtagcggacgggatgccgctcgctgcctccatt
caggatgatgaccagtcaggaagagacctccagcagtaccagagccaggccaagcagctg
tgccggaaactgaacgctcagagtccagaccgctgcaccctggaggctggcgtaatgaac
tttcactatttaatagcacagggtgtttgctacctgtctctctgcgaggcttcatttccc
aaaaagatggcatttgcataccttgaagatctccacagagagttctatgaccagtatgga
aggagagtgcagacagtgacgaggccatattctttcatcgagtttgacacatacatccag
aagacaaagaagtcgtacatcgacagcaggggcaggaggaacttgggcagtattaacaca
gagctgcaggatgtccagaggattatggtggccaatattgaggaagttctgcaacgagga
gaagccctttctgccctagacaccaaagccagcaatctgtccagcctgtccaagaagtac
cgcagcgatgccaagtacctcaacacccgctccacatatgccaaggtggctgccgtggcg
gtcttcttcgtcacactcatcatctatgtgcgcttctggtggctctga
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