Scomber japonicus (chub mackerel): 128368810
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Entry
128368810 CDS
T09718
Symbol
zgc:110269
Name
(RefSeq) probable flap endonuclease 1 homolog
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03030
DNA replication
sjo03410
Base excision repair
sjo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128368810 (zgc:110269)
03410 Base excision repair
128368810 (zgc:110269)
03450 Non-homologous end-joining
128368810 (zgc:110269)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sjo03032
]
128368810 (zgc:110269)
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128368810 (zgc:110269)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128368810 (zgc:110269)
DNA replication proteins [BR:
sjo03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
128368810 (zgc:110269)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
128368810 (zgc:110269)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
128368810 (zgc:110269)
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128368810 (zgc:110269)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
Bac_transf
Motif
Other DBs
NCBI-GeneID:
128368810
NCBI-ProteinID:
XP_053185669
LinkDB
All DBs
Position
12:complement(12915068..12918959)
Genome browser
AA seq
349 aa
AA seq
DB search
MGITKLADLIRLDAPGAISHKDISDYTGKVIALDTSIVVNQFRAATPLLSPLLGVFFRTL
TFLEHDIKPVFVFDGKPPGEKTAVLKKRAEAAGWGAPNCSGTASSQTKDCLQLLKLLGVP
VIQAPADAEALCAWLVREGTVDAVASEDMDTLPFGASILIRQLNAKKQSEVVEYSLSKLL
DKLQITHKEFVDLCILLGCDYCDKIAGLGPKRALTLIQKHRTIDNVVLHINRKTHPVPLF
WKYKEARKLFLDEPQIEVPKLIWTEPDEEALVQFFRCNNRRAKEERVRRRMDKFRQMRES
KREEREKEKAAGHSRQTRMEDFFRVTRKREQPVEMADSSNSNRKRPKPN
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggggatcaccaaactggcagatttgatccgtttagatgctcccggtgctatttctcac
aaggacatcagtgactacacaggaaaagtgatcgctttggacacctcgattgttgtgaac
cagttccgggcagctacacctttactaagccccttgttaggtgtcttctttcgcacgctg
accttcctagaacatgacataaagccggtctttgtatttgatgggaagcctccgggggaa
aagacagctgttcttaagaaacgagctgaagcagcaggttggggtgctccgaactgctca
ggcacagcatcatcccaaaccaaagactgtctccagctcctgaagcttctgggtgtaccc
gtcatccaggctccagcggacgctgaggccttgtgcgcctggctggtgcgagaggggact
gtggacgctgtggcatcagaggacatggacacactcccatttggagccagtattcttatt
cgccaactgaatgccaagaagcaaagtgaagttgttgaatattctttatccaagctgttg
gacaaactccaaatcactcacaaggagtttgttgacctatgtattttgctgggctgtgac
tattgtgacaagatagccggtttgggtccaaagagagctctgacactgattcagaagcat
cgtactattgacaatgtggttttgcatatcaacagaaagacccatcctgtgccacttttc
tggaagtacaaagaagcacggaagttattcttggatgaaccacaaatcgaagttcctaaa
ctgatctggactgagcctgatgaagaagccttggttcaattcttccgttgcaacaacaga
cgtgccaaggaggagagggtccgtcgacggatggacaagttccgtcagatgcgggaatct
aagcgagaggagagggaaaaggagaaggcagcgggacatagcaggcagactcgcatggaa
gacttcttcagagttactagaaagagggagcagcctgtggaaatggcagactcttcaaac
agcaacagaaagagaccgaagccaaactaa
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