Scomber japonicus (chub mackerel): 128368819
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Entry
128368819 CDS
T09718
Name
(RefSeq) semaphorin-6B-like
KO
K06842
semaphorin 6
Organism
sjo
Scomber japonicus (chub mackerel)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
128368819
NCBI-ProteinID:
XP_053185677
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Position
12:14996804..15010182
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AA seq
899 aa
AA seq
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MCSAAMATMAPPLTFLLLLLQLADGSFPEEPSPLSYVPIEVVRRYPVFLGRAHRSAQRQE
LHIQTVLQVNRTLYIGARDDLYRVELDNAAGDEMFYSKKRTWESNKNDIRVCRMKGKHEG
ECRNFIKVLLSQHGGLFVCGTNAFNPLCANYTKDTLEMVGEPVSGMARCPYDPRHANVAL
FADGSLFTGTVTDFLAIDAVIYRSLSDSPALRTVKHDSKWFREPYFVSAMEWGPHIYFFF
REMAMEFHHLEKVMVSRVARVCKADLGGSQRVLEKQWTTFLKARLNCSVPGDSHFYFNLL
HATSNIIHMQGRDVILGLFSTPPNSIPGSAVCVFDMQQLAHVFEGRFKEQKSPESIWTPV
PDEAVPKPRPGGCAVQGSRFSSSTTLPDEVLNFVKTHPLMDETVPLLGHRPWVVKTMGRY
QLTSMVVDTEAGPHKNRTVLFLGSTRGTILKFLMVPIRDSASHSSVFLEEVEGFNPEKCG
EDSPQARQLLSLSLDRVSHTLLLAFPSCLVRVPTSRCHLHSRCMKSCLASRDPYCGWTRG
STCSFLRPGTRLPFQQDVEYGNTTSHLGDCDGILQQSLLIEPESLVSLNLLVASAVSAFT
IGAALSGLAVCWIMAHKPANRRHGSTPQSSIQRRERSLLSNGGGMGGSVLSVTRQGGGDR
PCSQGGETLFVMPNGWVKSGELDPGFLPTPEHTPQQKRRGLRLSDSNSGGWDTSQTYLGG
GSVGLGSPCRMPPSVYLTTRLFPQGGGGRHSGECRGTDMPRQHYVCLSKQEKGVKGTPKV
PLRKSAGEYVYPMTPQDSPERRRVVSAPSAPMEYGEPLPLRWPAQEGYILSSHCMVPVPL
PPPSMPAPSGQAYVSQQHTPGLSRALLRGALERGELGELVDLSQLMSKKNCSDRTQTGQ
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgtgttctgctgccatggcgaccatggctcctcctctcacatttcttctcctgctgctt
caactggctgatggctcattcccagaggaacccagtccactcagctacgtccccattgag
gtggtgagaaggtatccagtgttcttgggcagagctcatcgttcagcacaaagacaggag
ctgcacatccagacggtcctccaagtcaaccgcacgctctacataggagccagagatgac
ttgtacagagtggagctagataacgcagcaggtgatgagatgttctacagcaagaaacgt
acatgggaatccaacaaaaacgacattcgagtatgccggatgaagggcaaacatgaggga
gaatgccgtaatttcatcaaggttctgctcagccagcacggtggcctgtttgtctgtgga
acaaacgccttcaacccactatgtgccaattacactaaagacactctagaaatggtggga
gagcctgtcagtgggatggcacgctgcccatatgatccacggcatgccaatgtggcttta
ttcgcagatggaagcctctttaccggtactgtgacagacttcctggccatcgacgcagtg
atctatcgtagcctcagcgacagccccgccctccgcacagtcaaacatgactccaaatgg
ttcagagagccctactttgtgagtgctatggagtgggggcctcatatttatttcttcttc
agagagatggccatggagtttcatcatctagagaaggtgatggtgtctcgtgtggctcgt
gtgtgtaaagcagacctgggtggttctcagcgcgtccttgagaaacagtggaccacattc
ctgaaggctcgactcaactgctccgtccctggagactcacatttctatttcaacctctta
cacgccacaagcaacattatccacatgcaaggacgagacgtcatcctgggtctcttctcc
acaccaccaaacagcatccccggctctgcggtgtgtgtgtttgacatgcagcagctcgct
catgtctttgagggccggtttaaagagcagaaatccccggagtctatttggactccagtc
ccagatgaagcagtgcccaaaccaagaccaggaggatgtgcagtccagggatccagattt
agctcttctacaacactaccggatgaagtgctgaactttgtgaagacccacccactgatg
gatgagacggttccactgctggggcacagaccctgggtggtcaaaactatgggacggtac
cagttgacatccatggtggtggacacagaagctggtcctcataagaaccgcacagtcttg
ttcctgggttcaacccgagggaccatcctcaagtttctaatggtccccatcagagattct
gcctcccactccagtgtattcctggaggaggtggagggattcaacccagagaagtgtgga
gaggactctcctcaggctcgtcagctcttgtctctgtcattggaccgggtgagccacact
ctgctgctggcctttccttcctgtctggtccgagttcccacatcacgctgtcacctacac
tcccgctgcatgaagagctgtctcgcctccagggacccatactgtggctggaccagaggt
agcacctgctccttcctgagaccaggcacacggctcccttttcaacaagatgtggaatat
ggaaataccacctcccatctaggagactgtgatggaatcctgcagcagagtctgctgatc
gaaccggagagcctggtctccctcaatctgctggtggcatctgcagtctcggcattcacc
attggggcggcgctctccggccttgctgtgtgctggattatggcccacaagcctgccaac
cgccgccatggcagcaccccccagtcctctattcagcggcgtgaaaggagcctgctgagt
aacggtggcgggatgggaggctcggtgctcagcgtgacacggcaggggggtggggaccgc
ccttgctctcagggtggggagaccctttttgtcatgcccaatggctgggtgaagtcagga
gagctcgacccaggtttcctgcccaccccggagcacacaccccagcagaaacgcagaggt
ctacgactgtcagactccaattccgggggatgggacactagtcagacctacctgggagga
ggctctgtgggtctgggttcaccctgtcgtatgcccccttccgtctacctgaccaccaga
ctgtttccgcaggggggaggtgggagacacagtggtgaatgccgggggactgacatgcca
cgccagcactatgtctgcttgagcaagcaagaaaaaggagtgaaggggacgcccaaagtc
ccactcagaaaatctgcaggagaatatgtataccccatgaccccccaggactcgcctgag
cgtcggagggtggtctcagctcccagcgcgcctatggagtatggcgagccattacctttg
cgttggccagcccaggaaggatacatcctcagcagccattgcatggtccctgtccccctg
cctccaccctctatgcccgctcccagtggccaggcgtacgtgtcccagcaacataccccg
gggctgagcagggctctgctgagaggggccctggagcgaggggagctgggcgagctggtg
gatctgagccagctgatgagtaagaagaactgcagtgacaggactcagactggccagtga
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