Scomber japonicus (chub mackerel): 128368821
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Entry
128368821 CDS
T09718
Name
(RefSeq) calreticulin-like
KO
K08057
calreticulin
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04141
Protein processing in endoplasmic reticulum
sjo04145
Phagocytosis
sjo04148
Efferocytosis
sjo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128368821
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
128368821
04148 Efferocytosis
128368821
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128368821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sjo03110
]
128368821
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
sjo04091
]
128368821
Chaperones and folding catalysts [BR:
sjo03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
128368821
Lectins [BR:
sjo04091
]
L-type lectins
128368821
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Calreticulin
DUF8634
Motif
Other DBs
NCBI-GeneID:
128368821
NCBI-ProteinID:
XP_053185680
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All DBs
Position
12:complement(23649211..23652901)
Genome browser
AA seq
424 aa
AA seq
DB search
MGKMQVLGVIAVMLVVYSVHAKVYFREEFLDGDEWRSRWVDSKHKSDYGEWKLTAGKFYG
DAEKDKGLQTSQDARFYATSARFEPFSNEGKPVVIQFTVKHEQKIDCGGGYVKVFPTDLE
QTAMHGDSSYYIMFGPDICGYSTKKVHVIFNYKGKNHLIKKEIKCKDDELSHLYTLILNP
DQTYEVKIDNNKVESGSLEEDWDFLPPKKIKDPEAKKPEDWDDRAKIDDADDTKPEDWDK
SENIPDPDAKKPDDWDEDMDGEWEPPMIPNPEYKGEWKPKQIDNPNYKGAWVHPEIDNPE
YSPDSDIYKFEKIGVLGLDLWQVKSGTIFDNFVITDDVKEAEDIGNETWGATKEPERKMK
QEQDDLKQKEDEEKTKEQDTEADEEEDEDIDEEEDEDDDEDTKDDMEDGPLETDDEEVKE
KDEL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaatgcaagtcttaggtgtaattgcagtaatgttagtggtttacagcgtacat
gcaaaggtttactttcgggaggagtttctggatggtgatgaatggagaagtcgctgggtg
gactccaaacacaagtctgactacggagagtggaaattgacggctggcaagttctatgga
gatgctgagaaagataaaggtctgcagacaagccaggacgctcgtttctatgccacctct
gcccgttttgagccttttagcaatgaaggcaagcctgtggtcatccagtttacagtcaag
cacgagcaaaagattgactgcggtggtggctatgtgaaggtcttccctactgacttggag
cagactgccatgcatggagattcctcatactacatcatgtttggccctgatatttgtggc
tacagcaccaagaaggttcacgtcattttcaattacaagggcaagaatcatctcatcaag
aaagaaattaagtgcaaggatgatgagttgtcccacttgtacacacttatcctgaatcca
gaccagacctatgaggtgaagattgacaacaataaggtagaatctggcagtctggaggaa
gactgggacttcctgcctcctaagaaaattaaggaccccgaagccaagaagccagaggat
tgggatgaccgtgccaagattgatgatgctgatgacaccaagcctgaggattgggacaaa
tctgaaaacattccagaccctgatgctaaaaagcctgatgactgggatgaggatatggat
ggagagtgggaacctcccatgatccccaaccctgagtacaagggagaatggaaacccaag
cagatcgacaatcccaactacaaaggagcctgggtgcaccctgaaattgacaatcctgag
tacagtcctgattcagacatctacaagtttgaaaagattggcgttttgggtcttgatctt
tggcaggtgaaatctggtaccatctttgacaacttcgtgatcacagatgatgtgaaggaa
gcagaagacattggaaatgagacatggggtgccacaaaggaaccagagaggaaaatgaaa
caggagcaagatgacctgaaacaaaaagaagatgaggagaaaaccaaagagcaagacaca
gaggctgatgaggaggaggacgaagacatagatgaggaggaggacgaagatgacgatgaa
gatacaaaggacgacatggaggatggacctttagaaacagatgatgaggaagtaaaggag
aaagatgagctttga
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