Scomber japonicus (chub mackerel): 128368826
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Entry
128368826 CDS
T09718
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2-like
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04145
Phagosome
sjo04814
Motor proteins
sjo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128368826
09142 Cell motility
04814 Motor proteins
128368826
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128368826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjo03036
]
128368826
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sjo04812
]
128368826
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
128368826
Cytoskeleton proteins [BR:
sjo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
128368826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Dynein_IC2
Beta-prop_EML
WD40_WDHD1_1st
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Nbas_N
Motif
Other DBs
NCBI-GeneID:
128368826
NCBI-ProteinID:
XP_053185685
LinkDB
All DBs
Position
12:14294974..14303177
Genome browser
AA seq
613 aa
AA seq
DB search
MSDKSELKAELERKKQRIAQIREEKKRKEEEKKKKDGDSKRGVEAGGGSSGGHEDSDLER
KRREAEALLQSVGITPDIPHVPAPMSPSNKSVGSDAGSQDSGDGNAGPRRGAVRLGMSKV
TQVEFVPKEMVSYSKETQTPTEALAHTDQKAEEEEDEEITPPPTAEDNQEEKEDQGEQQD
EDTPKELTEEEKLQVLHSEEFLSFFERGSRIVERALAEQVDVCFDYSGRDLEDKEGDLQA
GAKLVLNRQFAEERWTKNRVVTCLDWSPQYPELLVASYNNNEDAPHEPDGVALVWNMKYK
KGTPEYIFHCQSEVMSAGFAKFHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHT
HPVYCVNVVGTQNANNLISISTDGKMCSWSLDMLSQPQDSLELVFKQSKPVAVTSMAFPL
GDVNNFVVGSEDGSVYTACRHGSKAGITEVFEGHHGPVTGLSCHSAGGPVDFSHLFISSS
FDWTVKLWSTKSTRPLYSFEDSCDYVYDAMWSPTHPALFACVDLAGRLDLWNLNNDTEVP
TASVYVEGAPALNRVRWAHSGKEIATGDSEGQVQVYDVGEQICVPKADEWTRFVRTLAEI
NENRDEAEELANA
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaagagtgagctgaaggctgaactggagaggaagaaacaacggatcgcccag
attcgagaggaaaagaagagaaaagaagaagagaagaaaaagaaggatggagactcgaag
cgcggagtggaggctggaggtgggtcttctggcggccacgaagactctgacctggagaga
aagaggagggaggcggaggcgctgctacaaagtgtcggcatcaccccagacatacctcac
gtccctgcccccatgtctccctccaacaaatcagtgggcagcgatgcaggaagccaagat
tctggggatggaaacgcaggacccagacgtggagctgtgaggctgggaatgtctaaagtg
acccaggtggagtttgtcccaaaggaaatggtgtcgtactccaaagaaacccaaacaccc
actgaggcactggcacacaccgatcaaaaagcagaagaggaagaggatgaagagataact
cctcctccaacagcagaggacaaccaggaggagaaagaggatcagggtgaacagcaggac
gaggacactcccaaagagctgactgaagaagagaagctgcaggtcttgcactctgaggag
ttcttgtcatttttcgagcgaggcagcagaattgtagagagagctctggctgagcaggtg
gacgtctgcttcgactacagcgggagagacctcgaggataaggagggtgacttgcaggca
ggtgctaagctggtcctaaacagacagtttgcagaggaacgctggactaaaaacagagtg
gtcacatgtctcgactggtcccctcagtatccagagctgctggtggcttcgtataacaac
aatgaggatgctccacatgagcctgatggagtggcactggtctggaacatgaagtataag
aaaggcacacctgagtacatcttccattgccagtcagaggtgatgtctgccggctttgca
aagtttcaccccaacctggtggtgggtgggacgtactctggacagattgtcctatgggac
aacaggagcaacaagcgcacccctgtccaaagaacccccctgtctgcagctgcacacaca
cacccagtctactgtgtgaatgtggtgggaacccagaacgctaacaacctgataagcatt
tccactgatggtaaaatgtgttcctggagccttgacatgctctcccagccacaggacagt
ctggagctggtgttcaaacagagcaagccggtggctgtcacctccatggcctttcctctg
ggtgacgtcaacaactttgtagtggggagtgaggacggttctgtctacactgcctgccgc
catggcagtaaggcgggtatcactgaggtgtttgagggccaccatggtccggtgacgggc
ctgagctgtcacagtgctggaggacctgttgatttttctcatctcttcatttcctcctct
tttgattggaccgtcaaactctggagcacaaagagtacccgtccattgtactcgtttgag
gacagttgtgactatgtctacgatgcaatgtggtctccaacacacccagccctgtttgct
tgtgtggacctagctggacgcctggacctgtggaacctcaacaatgatactgaagttccc
actgctagtgtgtatgtggagggggccccagcgctgaaccgtgtgagatgggctcactct
ggtaaagagattgccactggagactcagagggacaggtgcaggtctatgatgtaggggag
caaatctgcgtgcccaaggctgatgagtggacacgcttcgtcaggactctggctgagatc
aatgagaaccgagacgaggctgaggagctcgccaacgcttga
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