Scomber japonicus (chub mackerel): 128368854
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Entry
128368854 CDS
T09718
Symbol
clstn2a
Name
(RefSeq) calsyntenin-2
KO
K22660
calsyntenin 2
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sjo04515
]
128368854 (clstn2a)
Cell adhesion molecules [BR:
sjo04515
]
Cadherins
Cadherin related
128368854 (clstn2a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_2
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
128368854
NCBI-ProteinID:
XP_053185720
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Position
12:complement(14070224..14214099)
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AA seq
955 aa
AA seq
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MQALGVPFLLFSGLFWGHSCALSGKVNKHKPWIETSYHGVITENMDTVLLDPPLVALDKD
APVPFAGEICAFKIYGQEAPFEAVVLNRTSGEGVLRASGPVDCESQKEYTFIIQAYDCGA
GPSGADWKKSHKAVVHIQVDDVNEFSPVFREPLYKASVTEGKIYDSILQVEAWDQDCSPQ
YSQICNYEIITAGTPFAIDRNGNIRNTERLSYDKQQSYKIMVTAFDCGQKRAREDVAVHI
DVKPVCKPGWQGWNKRVDYEPGTGSKQLFPKMHLETCGGPLSGVRAMVELQTNHIGKGCD
RETYSEKSLQKLCGAASGSTDLLPAPSPSTNWTASLLTDSGRDSDLIYQFDGHRAANVPD
HVVPQNLTDQFTIATWMKHGPSPGLRAEKETLLCSSDKTEMNRHHYSLYVHNCRLVFLLR
RDFTQVDTFRPAEFHWKLEQICDKEWHYYVINVEFPAVTLFVDGVTYEPYLVTDDWPIHA
SKIDTQLTVGACWQGGEVATPRFTQYFHGSLSGLTIRPGRIETQKVISCLQACKEGLDIN
SLESLAKDIKFHFNPAQSVLVVEGQDVDSINTAMTKVSYINSRQFPTPGLRRLHIATTVQ
CFGEDTCLSIPDIKAVVMVLPPSEPRITITGSNRLVRPASDLRGPLGVAPFKELHITSTV
MKGDSFGGSRRPGVMEVMHNLDYCDILVIGEELNPDRESLEIHHSALLGKHLDATNSTSG
ISIYGVDSMAHYEQALRQVRYRNGRPASLNERKFRLTCSELNGRYTSNEFNLEVSLLHHS
APVEHINHMAAQPQYMRPVHHPLMIHTMNSHMSGAAPPAATAVIVVCIAALVVIVVIGVY
RIHTTHQEGSREDEDGVKDADVDWDNSALTITVNPMENVRGDQTLNEEVKEEEREEEEEE
EEEEEEDEEQVGGMISTESDNSDEEDEEEEEEEREEAKGRKQKGKLEWDSSSITY
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcactcggggtcccttttttgctgttttctgggcttttctggggccactcctgc
gctctcagcggaaaagtcaacaagcacaagccgtggatagagacatcttaccatggtgtg
atcacagagaacatggacacggtgttgctggaccctccacttgtagctttggacaaggat
gccccggtcccctttgctggggagatttgtgcctttaagatctatggtcaggaggctcca
ttcgaggcagtggtattgaatcgcacatcaggggaaggagtcctgagagccagtggccct
gtggactgtgagagtcagaaagagtacacctttattatccaggcctacgactgtggagct
ggacccagcggggctgactggaagaaatctcacaaggcggtggttcacatccaggtggat
gacgtcaatgagttttcccctgtgtttcgggagccactgtacaaagcatctgttacagaa
ggaaagatctatgacagcattttgcaggtggaagcttgggaccaagactgttctccacag
tacagccagatctgcaactatgaaataatcactgcaggcacaccatttgccatagaccgc
aatggtaatatcagaaacacagagcgactgagctatgacaagcagcaaagctacaagatt
atggtgacggcctttgactgcggtcagaagagagcaagagaggatgttgctgtgcatatt
gatgtcaagcctgtctgcaaacctggatggcaaggatggaacaagcgggtggactatgag
ccagggactgggagcaagcaactgtttcctaagatgcacttggaaacatgcggtggtccc
ttatctggtgtgagagccatggtagagctgcagaccaatcacattgggaaaggctgtgac
cgggaaacttactctgagaagtctttgcaaaaactctgtggtgcagcgtcaggcagcact
gatctccttcctgcccccagcccttccactaactggactgcgtctttgctgactgacagc
gggcgagacagcgacctcatctaccaattcgatggacaccgggccgccaatgtcccagat
cacgtagtgccccaaaacctgactgatcagttcaccatagcaacatggatgaaacatgga
cccagtccaggacttagagctgagaaggaaaccttactttgtagctctgacaaaactgaa
atgaatcgacaccattactctttgtatgttcacaactgccgtctggtgttcctgctcaga
agagatttcactcaagtcgacactttcagacctgccgagttccactggaaactggagcag
atctgtgacaaggaatggcactattatgtgatcaacgtcgaatttcctgcagtgacacta
tttgtggatggtgtgacctatgaaccctatctggtgacagatgactggccaatccacgcc
tcaaagattgatacgcagctgactgtgggcgcctgctggcaaggtggtgaagtagcaacc
ccaaggttcacccagtatttccatggcagcctgtcaggtctgacaatccgaccaggccgc
attgaaacccagaaggttatctcctgtttgcaggcctgcaaagaaggccttgatatcaat
tcccttgaaagccttgctaaggacatcaagttccattttaaccctgcacagtctgtgctg
gtggtagaaggacaggatgtggacagcatcaacacagcaatgaccaaagtctcttacatt
aactctcgccagttccctacgcctggtctgcgacgattacacatcgccactactgtgcag
tgtttcggggaggacacgtgtctctccatcccggacattaaggcagtagttatggtcctt
cctcccagtgaaccgagaatcaccattacaggatctaatcgactcgtcaggcctgccagc
gacctgcggggcccgctgggtgtggctccgttcaaagagcttcacatcaccagcacagta
atgaagggagacagcttcggtggatcccgcaggccaggtgtgatggaggtcatgcataac
ctggactactgtgacatcctggtgattggggaagaactgaatcctgacagagagagtctg
gagattcatcacagtgctttgttgggaaaacatctggatgctaccaactccacctctggc
atatcaatatatggtgtggattccatggcccactacgagcaggcactgaggcaggtgcgc
tacaggaatgggcgtcctgcctccctgaatgaaagaaagtttagactcacgtgctctgaa
ctcaacgggagatataccagcaatgagttcaacttggaggtcagtcttcttcaccactcc
gcaccagtggagcatatcaaccatatggccgctcagccccagtacatgagacccgtccac
cacccactcatgatacacactatgaactcacacatgtcaggggcagcacctcccgcagcc
acagcagttattgtggtttgtatcgccgccctggtggtgattgtggtgattggcgtctac
agaatccacaccacacatcaggaggggtctagagaggatgaggatggagtgaaagatgct
gacgtggactgggacaattccgcactcaccatcactgtcaaccccatggagaacgtaaga
ggagatcagacactcaatgaagaggtaaaagaagaagaacgcgaggaggaggaggaggag
gaggaggaagaagaagaggatgaagaacaggtgggaggaatgataagtaccgagtcagac
aacagtgatgaagaggacgaggaggaggaagaggaggagagggaagaggcgaaggggaga
aagcagaagggaaagcttgagtgggacagttcctccattacatactga
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