KEGG   Scomber japonicus (chub mackerel): 128368972
Entry
128368972         CDS       T09718                                 
Symbol
kdm4ab
Name
(RefSeq) lysine-specific demethylase 4A isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
sjo  Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sjo03036]
    128368972 (kdm4ab)
Enzymes [BR:sjo01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     128368972 (kdm4ab)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     128368972 (kdm4ab)
Chromosome and associated proteins [BR:sjo03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    128368972 (kdm4ab)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 JmjN zf-HC5HC2H PHD_2 PHD Tudor_5 DUF7141 Rad9_Rad53_bind
Other DBs
NCBI-GeneID: 128368972
NCBI-ProteinID: XP_053185882
LinkDB
Position
12:complement(13422823..13442428)
AA seq 1190 aa
MASDVVPQNHGSKGIMTFYPTTEEFKNFSRYIAYVESQGAHKAGLAKIVPPKEWKPRSSY
DDIDDLMIPAPIQQVVTGQSGLFTQYNIQKKSMPVREFRKIANSDKFCSPHYDDFEELER
KYWKNVTFNPPIYGADVNGSLYDPDVKEWNICHLGTILDTVERESGITIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYCVPPEHGKRLERLAKGFFPGSSQNCEAFLR
HKMTLISPSILKKYGIPFEKITQEAGEFMVTFPYAYHAGFNHGFNCAESTNFATERWIEY
GKQSVLCSCRKDMVKISMDVFVKKFQPDRYEKWLAGRDMIPIDHSRPTPEAKEFLGESFN
DITSNSNSCSMDSYEEDGERKSTTQRIETKRHRVCLEVPDEVVPKDDDEEVELYGKRPRL
SLIPPRTISQDGKRNKGPPKLVVTPTKLTLMDPFHRGLSNSDPGRTPHYTKTRAPAIPSQ
SQPKNGHLSASVTPAWTEATTQPTRKMGVASLLFHRTLSPKDTLQVRSYTLEKHQQPHTQ
LQVHSYAREHQPRHLQLRACTLPHTQVQSSPQAQSCETKEPQPESKNILTKVALNDSEEH
SPVEKIQKEDKPKISVCLEAQAEEEKPEVEHISRPTSPETQHTELDKMEIEVPKNSKRKS
NQCPLADSGIVILKDTIPVRKPMHDEMKVIEPQCLQVLQENHYVSEEQSYCKSVVKKQQQ
QEELCRLPRHHPLIREVHSDDETFVDAEVEQEEKEEWAKPLTQLWQCRPYNPLSEREYNK
RMGQQAPYCSICLLFHTYHQSESGSGSSSMTLVNHPGGRQWSKPLIPEMCFNTQSTKMAD
SGEGQLSNPHVAGDETSRLVSCTQCCVRVHTSCYGVSGDEAELDDWLCARCEADATTEDC
CLCSLRGGALQRANNDKWVHVLCAITVLEARFVNITERSPIDLSAIPLPRFRLKCAYCRK
RMKTDVKGCCVQCSHGRCSTAFHPTCAQAAGILMHPDDWPFIVFITCHRHRAPVIPERDK
ASMRELAVGQKVICKYKNGRYYHSDVVELTTATFYEVVFDDGSYSDNLFPEDIENRDCIR
LGPPAEGAAVQVRWTDGLIYGAKFVASHSIPMYLVEFEDGSQISVKRDDIYTLDENLPKR
VKSRMSVASDMRFELFTQTNVKQNSKRQRVINSRYREDYIEPVIYRAIME
NT seq 3573 nt   +upstreamnt  +downstreamnt
atggcgtcagatgtggtgccccaaaaccatggttctaaggggatcatgacattttacccc
acaactgaggaattcaagaacttcagccgctacattgcatatgtggagtcccaaggagca
cacaaagcaggcctggctaaaattgtcccaccaaaggaatggaagcctcgaagttcctat
gatgatatagatgatttgatgatacctgcacccatccagcaggtggtgacaggccagtca
ggccttttcacccagtacaacattcagaagaagtccatgcctgtcagagagtttcgcaag
attgccaacagcgacaagttctgtagccctcactatgatgactttgaggagctggaaagg
aagtactggaagaatgtgacattcaacccccccatatacggagcagatgtcaatggaagt
ctgtacgaccctgacgtcaaagagtggaacatctgtcacctgggcacaattttggatact
gtggaacgtgaaagcggcatcactattgaaggtgttaatacaccctacttatattttggc
atgtggaagaccacctttgcatggcacactgaggacatggacctctacagtatcaactac
ttgcactttggggagcctaaatcatggtactgtgttcctccagagcatggaaaaagactg
gagcgtctggctaaagggttctttcctggtagttcccaaaattgtgaggcctttttgagg
cacaagatgaccctcatctccccctcaatactgaagaaatatggcattccatttgaaaag
ataactcaagaggccggtgaattcatggtaacttttccctatgcttatcatgctggtttc
aaccatggtttcaactgtgctgaatccaccaattttgccactgagagatggattgaatat
ggcaagcaatcagttttgtgctcatgccgtaaagacatggttaagatttccatggatgta
ttcgtgaagaaattccagccggatcgctatgaaaagtggttggcagggcgtgatatgata
cccatcgatcactcgcgaccaaccccagaggctaaggagtttttgggggagtccttcaat
gacattaccagcaacagtaatagctgctccatggatagctatgaggaggatggggagcgg
aagagcaccacgcaaaggatcgagaccaagagacaccgggtgtgtctggaggtgccagac
gaggttgttccaaaagatgacgatgaggaagtggagctgtatgggaagcgtcccaggcta
agtcttatacctccacgtactatttcacaagatggcaagagaaataaaggcccaccaaag
ttggttgtcacaccaaccaagctgactttaatggatccgtttcacagagggttaagtaat
agtgatccaggccgtacccctcactataccaagactcgtgcacctgccatcccgtctcag
tcgcagcccaaaaacggacatctgtcagcttcggtgacacctgcatggacagaagccaca
acccagcctacccgtaaaatgggggtagccagcttgctctttcacaggactctcagtcca
aaagacactcttcaagtgcgcagctacacactagaaaagcaccagcagcctcacacacag
cttcaggtgcacagctatgccagagagcatcaaccccgtcatctccagctcagagcctgt
acactgcctcacacacaggttcagtcctcgcctcaggcacaaagctgtgaaacaaaggag
cctcagccagaatccaaaaacattctcaccaaagtagcattgaatgattcagaagaacac
agtcctgtggagaagatccaaaaagaggacaaacccaaaatttctgtgtgtttagaagct
caggctgaagaagagaagcctgaagttgagcacatcagcaggcctacttcccctgaaact
caacacacagagttagacaaaatggagattgaagtcccgaagaacagcaaaagaaagagt
aaccaatgcccacttgcggatagtggcattgtcatcctgaaagacaccattcctgtcagg
aaaccaatgcacgatgagatgaaggtgatcgaacctcagtgtctgcaggtactgcaggag
aatcactatgtgtcagaagagcagtcgtactgcaaatcagtggtgaagaagcaacaacag
caagaagagctttgtcgacttcctcgtcatcaccctctaatcagagaggtgcacagtgat
gatgagacatttgtagatgcagaggtagagcaggaagagaaggaggagtgggcaaaacca
cttactcaactgtggcagtgtcgaccatataaccccctgtctgagagggaatacaacaaa
cgcatgggccagcaggccccttactgctccatctgtctgctcttccacacttaccatcag
tctgagtccggtagtggaagttccagcatgacgttggtgaaccatccaggaggccgccag
tggtcgaaaccactcatccctgaaatgtgtttcaacacccaaagcaccaagatggctgat
agcggggagggacagctgtctaacccacatgtagcaggggacgagaccagccggctggtc
agctgtactcagtgctgtgtccgcgtacataccagttgctatggtgtgtctggggatgaa
gcagagctagacgactggctgtgtgctcgctgtgaggctgatgccaccactgaggattgt
tgcctgtgttcactgagagggggagctctgcagagggccaacaatgacaaatgggttcat
gttctgtgtgcaatcactgtgctggaagctcgctttgtcaacatcactgagcggagcccc
attgacctctctgcaatcccactgccacgcttcagactgaagtgtgcatactgcaggaag
cggatgaagacggatgtgaagggctgctgtgtccagtgctcccatggacgatgctccact
gcttttcatcccacctgtgctcaggcagctgggatcctcatgcacccagacgactggccg
ttcatagtcttcatcacctgccatagacaccgagcacctgtcatacctgagcgtgacaag
gcttccatgcgggagttggcagtgggccagaaggtgatctgcaaatacaaaaatggccgt
tactaccacagtgacgtggtggaactgactacagccaccttctatgaggttgtgttcgac
gacggatcatacagcgacaatctcttcccagaggacatcgagaatagggactgtatccga
ctcggtccacccgcagaaggtgctgctgttcaagtacgatggacagacgggttgatatac
ggggcaaaattcgtagcatcgcactccatccccatgtacctggttgagtttgaggatgga
tcgcaaatctctgtcaagcgagatgacatctacactctagatgagaatctgcccaaaaga
gtcaagtcacgaatgtcggtggcgtcagacatgcgttttgagctcttcacacagaccaac
gtcaaacagaactccaaaaggcaacgggtcatcaactctcgatacagagaggactacatc
gagcccgtcatctaccgagccatcatggagtga

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