Scomber japonicus (chub mackerel): 128368986
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Entry
128368986 CDS
T09718
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128368986
Membrane trafficking [BR:
sjo04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
128368986
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
LRR_EndoS
LRR_14
Ig_2
LRRNT
LRR_LRWD1
LRR_9
LRR_6
V-set
Motif
Other DBs
NCBI-GeneID:
128368986
NCBI-ProteinID:
XP_053185906
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All DBs
Position
12:complement(15267638..15298129)
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AA seq
622 aa
AA seq
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MTGSPGPGGSAFVPWPRMWRWVLAASLIGIVTLTLPGSSQACPPRCECSAQLRSVSCQRR
RLTNIPEGIPTETQLLDLSKNRLRWVQAGDLAPYPRLEEVDLSENLIATLEPNAFATLQN
LKVLKLRGNQLKLVPMGAFAKLGNLTSLDLSENKMVILLDYTFQDLRSLKHLEVGDNDLV
YISHKAFSGLLGLEDLTIERCNLTSISGQTLSYLRSLVTLRLRHLSISALEDQNFRKLSN
LRGLDIDHWPYLEYISPFSFQSLDLHWLSITNTNITSVPSASFKNMVHLTHLNLSYNPIT
TLEPWAFRDLLRLKELIMVSTGLMTVEPYALGGLRQIRVLNFSSNDLQTLEEGSFHSVNS
LETLRVDGNPLMCDCRLLWILQRRKTLNFDGRVPVCAGPVEVQGVSLSTFTDSALFDHFT
CQKPKIRNRKLQQVIAREGQPVSFLCRAEGEPAPAIVWISPQRRRITAKSSGRITVLPSG
TLEIRYAQLTDSGTYICIASNAGGNDTYFATLTVRGQPLDAASAFFLNRSLYSGEFFNDT
NLNSTRVFLKFTLDLTTILVSTAMGCITFLGVVLFCFLLLFVWSRGRGQRKNNFTVEYSF
RKSEPATGGSSGGTRKFNMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgactggctctcctggacctggtgggagtgcctttgtgccatggccgaggatgtggcga
tgggtcctggctgcttctttgatcggcattgtaactttgacactgccaggaagtagccag
gcctgcccaccacggtgtgagtgctcagctcagctgaggtcagtgtcatgccagcggagg
cggctcaccaacatcccagagggcattcccacagagacacaactcctggatctcagcaag
aaccggctccgctgggtgcaagcaggtgacctggcaccgtacccacggctggaggaagtg
gacctcagtgagaacctcatcgccacattagagcccaatgccttcgccacactccagaat
cttaaagtgctgaagttgagagggaaccagctgaagttagtgcccatgggggccttcgcc
aagctgggcaacttgacaagcctggacctgagtgagaacaagatggtgattttattggac
tacactttccaggatctgaggagtctgaaacatctggaggtgggagataacgacctggtt
tatatatcccacaaggcattctcagggctgctggggctggaagatctcacaatagaacgc
tgcaacctgacatccatttctggccagacgctgtcctacctccgcagcctggtcaccctt
cgcctccgtcacctcagcatctctgccctggaggaccagaacttccgcaagctctccaac
ctgcggggtctggatatcgatcactggccatacctggagtacatttccccttttagtttc
caaagcctggatctccactggctctccatcaccaacaccaacatcacgtccgtcccctct
gcttccttcaagaacatggtgcacctcacacacctcaacctctcctacaatcctatcacc
accctcgagccctgggccttcagagacctgttgaggctgaaggagctcatcatggtaagc
acagggttgatgactgtggagccctatgcccttggaggcctccgacagatccgcgtcctc
aacttctcctccaacgacctgcaaaccttggaagagggctccttccactctgtcaacagt
ctggagaccctcagagtggatgggaaccccctgatgtgtgactgtcgtctgttgtggatc
ctgcaaagacgcaagaccctcaactttgacggcagagtgccggtgtgtgcagggccggtg
gaggtgcaaggggtcagcctgagcaccttcaccgattctgcactcttcgatcactttaca
tgccagaaacctaagatacgcaaccgtaagctccagcaggtgatagctcgtgagggccag
ccagtgagtttcctttgtcgtgccgaaggagaacccgcacctgctattgtctggatttcc
ccacagcgcagacggatcactgctaagagttcagggcgaattactgttctccctagtggc
accctggagatccgctacgcccagcttactgacagcggcacatacatctgcattgccagt
aacgccggaggcaatgacacctactttgctacacttacagtccgtggccagccgttagat
gctgcctcagctttctttctcaatcgctcgctgtatagcggcgagttcttcaacgacaca
aatctgaacagcacacgtgttttcctcaagttcaccttggacctgaccaccatcttggtc
tccacggcaatgggttgcatcaccttcctgggggtggtcctcttctgtttcctgctgttg
ttcgtgtggagccggggacgcggccaacgcaagaacaacttcacagtggagtactctttc
cggaaatctgaacccgccactggaggctcctcaggagggaccaggaagttcaacatgaaa
atgatatga
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