Scomber japonicus (chub mackerel): 128368987
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Entry
128368987 CDS
T09718
Name
(RefSeq) fizzy-related protein homolog
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04110
Cell cycle
sjo04120
Ubiquitin mediated proteolysis
sjo04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128368987
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128368987
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
128368987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128368987
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
128368987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_EML
Beta-prop_WDR19_1st
EIF3I
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_WDR41
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_1st
Beta-prop_SCAP
ELYS-bb
Beta-prop_VPS8
Ge1_WD40
Beta-prop_SPT8
Tom37
Motif
Other DBs
NCBI-GeneID:
128368987
NCBI-ProteinID:
XP_053185907
LinkDB
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Position
12:15342388..15349300
Genome browser
AA seq
496 aa
AA seq
DB search
MDQDYECRLLRQINIQNENASPIKSLGVARALTPTSSPLSSPSKHGDRFIPSRAGANWSV
NFHRINEIEKSHNQNRKTKDGTTDSNKADGLAYSALLKNELLGAGIEKVQDPQSEDRRLQ
PSTPAKRSLFSYSVSAKRALPEEDGNTVSPYSLSPVSSNSQKLLRSPRKPTRKISKIPFK
VLDAPELQDDFYLNLVDWSSLNVLSVGLGTCVYLWSACTSQVTRLCDLSVEGDSVTSVGW
SERGNLVAVGTHKGYVQIWDAAAGKKLSVLEGHTARVGALAWNADQLSSGSRDRVILQRD
IRAPPLQSERRLQGHRQEVCGLKWSTDHQLLASGGNDNKLLVWNHSSVLPVQQYTEHLAA
VKAIAWSPHQHGLLASGGGTADRCIRFWNTLTGQPLQCTDTGSQVCNLAWSKHTNELVST
HGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKMR
STKESVSVLNLFTRIR
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggatcaggactatgagtgcaggctgctcagacagataaacatccaaaatgagaatgcc
agcccaataaaatctttaggagtggcgcgagctctgacacccaccagctcccccctgtcc
tcccctagtaagcatggtgatcgcttcattccctcccgggccggagctaactggagtgtc
aacttccatcgtatcaatgaaattgaaaagtcgcacaatcaaaacaggaaaaccaaagat
ggaacaacagacagcaacaaagcggacggcctggcttactcggctctgctgaagaacgag
ctgctgggagcgggcattgaaaaagtccaggacccccagtctgaagaccgccgcctgcag
ccatctactccagccaagaggagcctttttagttattctgtaagtgctaagagggctctg
cctgaagaggatggaaacacagtctctccgtattctctatcacctgtcagtagcaacagc
cagaaactgctacggtcgccaaggaaaccgacgcgcaaaatttccaaaattccattcaaa
gtcctggacgctccagagctccaggacgacttctacctcaacttagtggactggtcctct
ctgaatgtgctcagtgttggactgggtacctgcgtatacctgtggagtgcctgcaccagc
caggtgacccgtctatgtgacctttctgtagaaggagattctgtaacatcagtgggctgg
tcagagaggggaaacctggtggcggtggggactcataaaggatatgtacagatttgggat
gcagcagcagggaagaagctctctgtactagaaggacatacagccagagtgggtgcgttg
gcatggaatgcagaccagctgtcgtctgggagccgtgatagggtgattctgcagcgggac
atcagagccccacctctccagtcagagcgccgcctgcaagggcacagacaggaagtgtgc
ggtctgaagtggagcacagaccaccagttgctagcgtcaggtggaaatgacaacaagctg
cttgtgtggaaccactcgagtgtcctcccagtgcagcagtacacagagcacttggccgcg
gtgaaggccatcgcctggtccccccaccagcacggcctgctggcctcgggaggcggcacc
gccgaccgatgtatccgcttttggaacactctgacaggccagccactgcagtgcaccgac
accggctcccaggtctgcaacctggcctggtccaagcacaccaacgaactggtcagcaca
catggttattcccagaaccagatcctggtgtggaagtatccctccctcactcaagtagcc
aaacttacaggacattcctacagagtactttacctggccatgtcccctgatggagaggcc
attgtaacgggagcaggagatgaaacacttcgcttctggaacgtctttagcaagatgaga
tcaactaaggagtcggtgtcagtgttgaacctcttcaccagaatccggtag
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