KEGG   Scomber japonicus (chub mackerel): 128369030
Entry
128369030         CDS       T09718                                 
Name
(RefSeq) cullin-3-like
  KO
K03869  cullin 3
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo04120  Ubiquitin mediated proteolysis
sjo04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    128369030
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    128369030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sjo04121]
    128369030
   03400 DNA repair and recombination proteins [BR:sjo03400]
    128369030
Ubiquitin system [BR:sjo04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     128369030
DNA repair and recombination proteins [BR:sjo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     128369030
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 DUF6655 Stu2_CTS
Other DBs
NCBI-GeneID: 128369030
NCBI-ProteinID: XP_053185958
LinkDB
Position
12:16244952..16254960
AA seq 766 aa
MSNLKGGTKKDTKMRIRAFPMTMDEKYVNNIWDLLKNAIQEIQRKNNSGLSFEELYRNAY
TMVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDI
LMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGA
IRNACQMLMILGLDGRSVYEEDFEGPFLDMSAEFFQMESQKFLAENSASVYIKKVEARIN
EEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKL
FSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKTRFDRFLLESFNN
DRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRFM
QEKDVFERYYKQHLGRRLLSNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNT
TMDEFRQHIQSTSASLSGVDLTVRVLTTGYWPTQSATPKCTIPPAPRHAFEVFRRFYLAK
HSGRQLTLQHHMGGADLNATFYGAVKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTIL
MLFNNREKCTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHVFTVN
DQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVL
VAEVTQQLRARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgtccaacctcaaaggcggcaccaagaaggacaccaagatgaggatacgagcctttcct
atgacaatggatgagaagtatgtgaacaacatctgggaccttctgaagaatgccatccag
gagattcagaggaagaacaacagtgggctcagctttgaggagctgtacaggaacgcctac
acgatggtgctccacaagcatggagagaagctctacacaggcctgagggaggtcgtcaca
gagcacctcatcaacaaagtacgggaagacgtcctaaactctctaaataataactttctg
caaacactgaatcaggcctggaatgaccatcaaactgccatggttatgatcagagacatc
ctcatgtacatggaccgagtctatgttcagcaaaacaatgtggagaatgtgtacaacctc
ggcctcatcatattcagggaccaggtggtgcgctacggctgcattcgagatcacttacgg
cagacgttactggacatgatcgcacgtgagaggaagggagaagtggtggacagaggggca
atcagaaatgcttgccagatgctgatgattcttggcctggatggcagatctgtttatgag
gaggacttcgaaggcccattcttagatatgtcagccgaattcttccagatggagagccaa
aagttcctagcagaaaacagtgccagtgtctacattaagaaggtagaggccagaatcaat
gaggagatcgagcgagtaatgcactgcctggacaagtcaacagaggagcccattgtcaag
gtggtggaaagggagctcatttctaaacacatgaagactattgtagagatggagaactct
ggtcttgtccatatgctcaagaatggcaagacagaagacctggcatgcatgtacaagctg
ttcagtcgggtgccaaatggcctgaaaactatgtgcgagtgtatgagctcttacctgaga
gaacagggcaaggctcttgtgtcagaagaaggagaaggcaagaaccctgtcgactatatc
cagggcctgctagacctcaaaacacgttttgatcgtttcctccttgagtcgttcaacaat
gacagattgttcaaacaaaccatagccggagactttgagtattttctcaatctcaactcc
cgctcaccagagtacctatccctcttcatcgatgataagctcaagaagggagtcaaaggg
ttgacagaacaggaggtggagtctatccttgacaaagcgatggtgctgttcaggttcatg
caggagaaggatgtgtttgaaaggtactacaagcagcatctgggccgcaggctgctcagc
aacaagagtgtctcagacgactcagagaagaacatgatctctaagctcaagacagaatgt
ggctgtcagttcacttcaaaactggaagggatgtttagagacatgagcatctccaacact
accatggatgagttcaggcagcatatacagtctacgtcggcatctctaagtggagtggac
ctcacagtaagagtcctcactactggttactggcctacacagtcagcaacacccaaatgc
accatcccccctgctcccagacacgcctttgaagtctttaggaggttttacctcgccaaa
cacagcggtagacagctcacattgcagcaccacatgggtggagcagacctaaatgcaact
ttctatggagctgttaaaaaggaggatgggtcagaagtgggtgtgggaggcgcccaggtg
acgggctctaacacccgtaagcacatactgcaggtctccaccttccagatgaccattctc
atgctcttcaacaacagagaaaagtgcacttttgaggagatccagcaggagacagatatt
cctgagcgggagctggtgcgagcgttgcagtctttggcctgtgggaaacccacacagaga
gttctcaccaaggagccaaagtccaaggagatagagaatggccatgtgtttacagtcaat
gatcagtttacttccaaactgcacagagtcaaaatacagacagttgctgctaaacaaggg
gagtcagatcctgaaaggaaagagacgcggcagaaagtggatgatgacaggaagcatgag
attgaggcagccattgtccgaatcatgaagtcgaggaagaagatgcagcacaatgtcctg
gtggcagaggtgactcagcagctccgggctcgttttcttcccagtcctgtggtaatcaaa
aagcgtatagaaggactaatagaaagagaatacttggcgaggacaccagaagatcgtaaa
gtgtacacctacgttgcgtaa

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