Scomber japonicus (chub mackerel): 128369040
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Entry
128369040 CDS
T09718
Symbol
lrrcc1
Name
(RefSeq) leucine-rich repeat and coiled-coil domain-containing protein 1
KO
K16475
leucine-rich repeat and coiled-coil domain-containing protein 1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjo03036
]
128369040 (lrrcc1)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
128369040 (lrrcc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_8
LRR_9
LRR_6
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
128369040
NCBI-ProteinID:
XP_053185968
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All DBs
Position
12:22052213..22065186
Genome browser
AA seq
1018 aa
AA seq
DB search
MEDKELSLINKNITSLLDVPLRPTVTSLNLHCNQIPRIEGLTSAWHLRHLDLSSNCISKI
EGLSSLTSLRTLNVSCNTITEVEGLNGLVNLTRLNLSYNQINNLTGLLYLHGPDYKLKHL
SLHSNHLHCIDHVLQCLLGLQGLSEVTLSQNGSENPVCRSPGYRDIVMQSLPQITVLDGV
DRLGNPLHSGINSPLDIPGLEDYVDLLFSSDASRNEVVVSNVSITTPRIDEVLTQFRQRI
ASETIADPVAQPDKQRCQQVHSTVADPADPVNEERIRKLEHQVSQLVQQAPVGDKSSYST
NSVLTTRKAKKDTDHTSESECDSGKENRRRTRIPKHRNTVTTRMTKKETKGRRSDSDQEN
HKQRSSKSAVGPRGTSGVARGADAVGPARRGPVRAAMASGDVKTKSTKEEETYRTIVEER
DQERERRWKAEQAVRKLTEELKCLQTKVSEEKDLQSMALHTTDRLKESLLKERSGRSGLQ
TRVEELEGRCQSLIQQLEQARNSEEQHKTALRRLEESISHGETLRARQQAEEMKRHQELE
NKAAALKRELDIQRVSVRQHKDKLQQLHELLAAREQEHRKQLELRLQPGGADFREAVVKE
VASAEQRHAHRQAELEEKLVEGRKEYAALEDEFRMALTIEAARFYEVKEACDQMTAELLE
LKATLSQSQQREKKSGALVQELTAMVKEQKKRISELIKTKKDAVSELKSRLHSLETEVEQ
DRRLSLQLELLKKDKGRLLSQLTAQESVIDGLRAERRIWGQELAQQGASLAQDRGRLEAR
IEVLGTELETQKKQNERDSDALKIKTRIIDDQTETIRKLKEALQERDEQIRRLREEAVQV
QKKFQQQLEEETTRLADLRERLEHLSLRKEELKQQLEDKEAELEEVKTVYRDSSKKWQEK
AELLTRLESQVKRMKENFDSKERLLLEERDKATEAHKDAVEKLHCVDDAFRRQLESIQAA
HQTEQLRLANEKQKQIEKANQRVFDVEEEMRQLLEETETNKRIMEEKMKRLTSVLKDF
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaaagagctgagtcttattaacaagaacataacaagtttgttggatgtccct
ctgcgtcccactgtaacatcactcaatctacactgcaatcaaatcccaaggatcgagggt
ctgacctcagcttggcacttgaggcacttggacctttcttccaattgcatttctaagatt
gagggtctaagttccctcacatccctgaggactttaaatgtgtcttgcaacacaatcacg
gaggttgaaggactgaatggccttgtgaacttaactagattaaacttgtcctacaatcag
ataaataaccttactggcttgttgtatctccatggcccggactacaagctgaaacactta
agtctccatagcaaccacctgcactgtatcgatcatgtcctgcagtgcctgctgggattg
caaggtttaagtgaggtcactttgagccagaatggctccgaaaatcctgtctgtaggtcg
ccaggttacagggacattgttatgcagtcgttgccacagatcactgttctggatggtgtg
gaccgactgggaaatccattgcattctggcataaatagtcccctggatatccctggtctt
gaggactacgtggacctcctgttctcctctgatgctagtcgtaatgaagtggttgtaagc
aatgtgtccatcaccacaccccgcatcgatgaggttctgacccagtttcgtcagcggatt
gcctctgaaacaatcgcagatccagttgcacaaccagataagcagcgatgccaacaggtt
cactccactgtggctgatccagcagatcctgttaatgaagaacgcatcaggaaactggag
caccaggtgtcccagcttgtccagcaggcccctgtgggtgacaaatccagttactctacc
aattctgtgttgacgacacgcaaagccaagaaggacacagaccacacgtcagagagtgag
tgcgatagtgggaaggaaaaccggaggcgcaccaggatcccaaaacatcgtaacactgta
accacgaggatgaccaagaaggagaccaagggcaggagatcagacagcgatcaggagaat
cataaacagaggagttcaaagtctgctgtagggcccagggggacgtctggcgtcgcaagg
ggtgcagacgcagtggggccagcaaggaggggaccagtgagagctgccatggcctcaggc
gatgtgaaaaccaagtccactaaggaggaagaaacctacaggactattgtggaggagcgt
gaccaggaaagggagaggcgttggaaggccgagcaggctgtgaggaaactaacagaggag
ctgaagtgcctgcagacaaaggtcagcgaggaaaaagacctgcagagcatggccctgcac
accacagacagactgaaagaatcgttgctaaaggagcgatcagggcgctccgggctgcag
actcgtgttgaggagctggaggggaggtgtcagtccctaatccagcagctggagcaggcc
cgcaacagtgaagaacaacataagactgcactgcgcagactggaggaaagcatttcccat
ggcgagacgctcagggctcgccagcaggctgaagagatgaagcggcaccaggagctggaa
aataaggcagcagctctgaagagggagttggatatccagagagtttcagtacgccagcac
aaagacaaactacagcagctgcatgaactgttggcagccagagaacaagagcacagaaaa
cagctggaactgcgtttgcagccgggaggggcagatttccgtgaggcagtggtgaaagaa
gtagcatcagcggagcagagacatgcccacaggcaggcggagctggaggagaaactggtg
gagggcaggaaagaatacgctgctctggaggatgagttccgcatggcactaaccatcgag
gctgctcgcttctatgaggtaaaagaggcttgtgatcaaatgactgcagagctgttggag
ctcaaagcgaccctaagccagtcgcaacagagagagaagaaatctggtgctctggtgcag
gagctcacagccatggtcaaggaacagaagaaacgaatttctgagctcatcaaaaccaag
aaagatgctgtcagtgaactaaagagccggctgcattccttggaaacagaggtggagcag
gaccggcgactcagcctgcaacttgagttgcttaagaaagacaagggtcgactgttgtct
cagctcacagctcaagagtctgtgatagatggccttagggcagagagaaggatctggggc
caggagctcgctcagcaaggagcatctctagctcaggatcgtggacgcctggaggcgagg
atagaggtgctggggactgagctggagacacagaagaaacagaatgaaagggacagcgat
gccctcaaaattaaaaccagaatcattgatgaccagacagaaaccattcgcaaactcaaa
gaggccttgcaggagcgtgacgaacagatacgtaggctgcgtgaggaggcggtccaggtc
cagaagaagttccagcagcagctcgaagaggaaacgactcggctggcagacctcagagag
cggctggagcatctcagcctgcgcaaggaggagctgaaacagcagttggaggacaaggag
gcagagcttgaggaggttaaaacagtttacagggattccagtaagaaatggcaggagaag
gcagaactgctcactcgactagagagccaggtgaagcgcatgaaggagaactttgattct
aaggaacgcttgctgctggaggaaagagataaagcaacagaagctcacaaagatgcagtc
gagaagttgcactgtgtggacgatgcatttcgtcggcagctggagtctatccaggctgcc
catcaaactgagcagcttcgactggctaatgaaaagcagaaacagatagagaaggccaat
cagagggtatttgatgtggaggaggagatgcgtcaactcctggaagagacagaaactaac
aagagaatcatggaagaaaaaatgaagcgtctcaccagtgtactgaaagacttttaa
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