Scomber japonicus (chub mackerel): 128369054
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Entry
128369054 CDS
T09718
Name
(RefSeq) inner ear-specific collagen-like
KO
K24214
otolin-1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
128369054
Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
C1q domain-containing proteins
Adiponectin / short collagen group proteins
128369054
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GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
128369054
NCBI-ProteinID:
XP_053185986
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Position
12:complement(17100106..17102013)
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AA seq
497 aa
AA seq
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MSLTRLLLLTTVLMVLMATLTSSARTTRWPKTQSTKKPPRAGGSGGGGRTTTTTPSPSSS
LPTEETTEVMMDAYTLSPTDSTTYPNDIYSTEFHTDAIAPPGSNHGNYTLDYNECFFNFC
ECCPPQRGPIGPMGEKGPIGLQGERGPPGYPGEKGDMGLRGPPGPAGLPGANGLNGDIGD
KGGQGPVGPPGAPGIPGKTGEKGDPGPRGEKGERGFNGLKGDPGERGEPGLNGTKGSTGR
EGPMGPPGVGGTKGQKGEQGLTGECLTGEKGDVGVRGPPGPRGEMGPAGMNGTDGAKGQR
GELGPPGGKGDTGARGPPGPLGPRGIAGLRGERGVKGGRGPRGPKGPPGESVEQVRSAFS
VGLFPSRSFPPPGVPVKFDKVFYNGEGHWDPALNKFNVTHPGVYLFTYHITVRNRPVRAA
LVVNGMRKLRTRDSLYGQDIDQASNLVLMQLNDGDQVWLETLRDWNGVYSSSEDDSTFSG
FLLYPDSKSKSTNMENM
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaactcgcctgctcctcttgacaactgtcctcatggtcctgatggccacgttg
acctccagtgcccgaaccacacgctggcccaaaactcagagcaccaagaagccccctaga
gctggtggcagcggtggaggtgggcggaccacaaccacaaccccatcaccttccagcagc
ctgcccacagaagagacaactgaggttatgatggatgcttacactctgtcccctacagac
agcaccacataccccaatgatatttactccactgaattccacaccgatgccatagcgccc
cctgggagcaaccatggaaactatacccttgactacaatgaatgcttcttcaacttttgc
gagtgctgtccaccacagagaggtcccatagggcccatgggggagaaaggccctatcgga
ctgcaaggagagaggggccctccagggtatccaggagagaagggagacatggggctcaga
ggaccgccaggcccagcaggactacctggagccaatggactcaatggcgacataggtgat
aaaggtggtcaaggacctgtgggtccacctggtgcacctgggattcctggaaaaacagga
gaaaaaggtgacccaggccccagaggagaaaaaggtgaacgtggcttcaacggtttgaaa
ggggacccaggagaaagaggagagcctggcctgaatggtactaagggcagcactgggcga
gaggggcctatgggtcccccaggagttggtgggacaaagggtcagaaaggtgaacaggga
cttacaggcgagtgtttaacaggtgagaaaggtgatgtgggtgtgcgtgggccacctgga
ccaagaggggagatgggccctgcaggaatgaatggaactgatggtgcaaagggacaaaga
ggggagctggggcctcctggagggaagggggatactggggccagagggccccctggacct
cttggtccaaggggcatagcagggttgagaggggaaaggggagttaaaggaggacgaggg
cctcggggccctaaaggccctccaggtgagagtgtagaacaggttcgctctgccttcagt
gtgggcttgttccccagcaggtccttccctccaccgggcgttcctgtgaagtttgataag
gtgttttacaacggggaggggcactgggacccagctctcaacaagttcaacgtcacccac
cctggggtctacttattcacttaccacatcactgtgcgcaaccggcctgtgcgtgctgcc
ctggtggtgaatgggatgagaaagctgcggacacgggactcgctgtacggccaggacatc
gatcaagcttccaacctcgtactgatgcagctgaacgacggcgatcaagtttggctggaa
actctgagagactggaatggtgtttactccagcagtgaggatgacagcactttctctggc
ttcctgctctacccagactcaaagagcaaatctacaaatatggaaaacatgtaa
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