Scomber japonicus (chub mackerel): 128369067
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Entry
128369067 CDS
T09718
Symbol
foxc1a
Name
(RefSeq) forkhead box C1-A
KO
K09396
forkhead box protein C
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128369067 (foxc1a)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix developmental regulators
128369067 (foxc1a)
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Gene cluster
GFIT
Motif
Pfam:
Forkhead
Motif
Other DBs
NCBI-GeneID:
128369067
NCBI-ProteinID:
XP_053186001
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Position
12:19394698..19396116
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AA seq
472 aa
AA seq
DB search
MQARYSVSSPNSLGVVPYISSDPSYYRAAAGGGYTGMPAPMNMYSHAAHDQYPASMARAY
GPYTPQPQPKDMVKPPYSYIALITMAIQNSPDKKVTLNGIYQFIMERFPFYRDNKQGWQN
SIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVIKEKE
ERLQKDLPPRQQGREQEQSVQGSQPVRIQDIKTENGTVTPPQADSPSLSTVPKIESPDSS
SMSSGSPHSIPSSRSIGMDSSEHHQHHGQASTQGFSVDNIMTSLRGSPQGATELTPSLTA
SSRTGITPSLSLNYSPSQTSVYSSPCNQNSISTTSNATYHCNMQAMSLYAGDRSSHLAPS
TTVDETLPDYSVTTTSSSLTHGNLNSGQEGHHPHQGRLTSWYLNQAGDLGHLGAAYPAQQ
QNFHSVREMFESQRIGLNNSPVNGNNSCQMSFPPSQSIYRTSGAFVYDCSKF
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctcgctactccgtctccagtcccaactcactgggcgtcgtgccgtacatcagc
agcgaccccagctactaccgggccgccgccggagggggatacacagggatgccagcacct
atgaacatgtactctcatgcggctcatgaccaataccctgccagcatggctcgggcttat
ggaccatacactccccaaccccagcccaaggatatggtcaaacctccctatagttacatt
gcgctcatcactatggctatccaaaactcgcctgacaagaaagtgaccctaaatgggatt
taccagtttatcatggagaggtttccattttaccgtgacaacaagcagggctggcagaac
agcatcagacacaatctgtccctgaatgagtgttttgtcaaggtgccccgtgatgataaa
aaacccggtaaaggcagctactggaccctggacccagactcttacaacatgtttgaaaac
gggagcttcttgaggaggaggcgacgattcaaaaagaaggacgtgataaaagagaaagaa
gagcggctacagaaggatctgccgccgaggcagcaaggccgggagcaggagcagtcggtg
cagggctcccagcctgtgaggatccaggatattaagacagagaatgggactgtgacgcca
ccacaggccgactcgccctctttgagcaccgtgcccaaaatcgagagtccagacagcagc
agtatgtccagtgggagccctcacagcatcccctccagtagatccatcggcatggacagc
tctgagcaccaccaacaccatggtcaggcctcgacgcagggcttcagcgtagacaatatc
atgacctccctccgggggtccccacaaggggccactgagctcacccccagcctcaccgcc
tccagcaggacaggtataacaccgtctttgtccttaaactattctccaagtcagacatct
gtctatagttccccttgtaaccaaaactccatctccactacctccaatgcaacctatcat
tgtaacatgcaagccatgagcttgtacgccggggacagatctagccacttggcaccgagt
accaccgtggacgaaacgttgccagattactcagtcactaccacctcatcctccctgacc
cacggtaatctaaactctgggcaggagggccaccatccccaccaagggaggctgacctca
tggtacctcaaccaggccggagacctgggccacctgggcgcagcttatccagcacagcag
cagaacttccattcagtccgagagatgtttgaatcccaaagaattggcttgaataattca
ccggtgaatgggaataacagctgtcagatgtcattcccaccgagccagtccatctatcgc
acttcgggagctttcgtatatgactgtagcaagttctga
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